RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ARHGDIAP52565 204 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 PNLIPRP1P54315 467 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 MEF2AQ02078 507 aaPredicted RBP16.89■□□□□ 0.3
USH1C-205ENST00000527020 ZNF763Q0D2J5 394 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 GAB4Q2WGN9 574 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 COX20Q5RI15 118 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 FAHD1Q6P587 224 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 COMMD6Q7Z4G1 85 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 SFTPA1Q8IWL2 248 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 VPS37AQ8NEZ2 397 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 OR4K1Q8NGD4 311 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 OR9A1PQ8NGU1 263 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 WDR48Q8TAF3 677 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 DGCR6LQ9BY27 220 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 PSME2Q9UL46 239 aa16.89■□□□□ 0.3
USH1C-205ENST00000527020 NDRG4Q9ULP0 352 aaKnown RBP16.89■□□□□ 0.3
USH1C-205ENST00000527020 hCG_2014768A0A024R1R8 64 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 PIPSLA2A3N6 862 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 E9PQ18 207 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 DPM1O60762 260 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 C6P13671 934 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 PPIBP23284 216 aaKnown RBP16.89■□□□□ 0.29
USH1C-205ENST00000527020 FSHRP23945 695 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 AQP1P29972 269 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 CD6P30203 668 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 VIPR2P41587 438 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 HBA1P69905 142 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 IL1RL1Q01638 556 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 MC1RQ01726 317 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 TAP2Q03519 686 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 AQP6Q13520 282 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 TSTA3Q13630 321 aaPredicted RBP16.89■□□□□ 0.29
USH1C-205ENST00000527020 STARD3Q14849 445 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 MPEG1Q2M385 716 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 ANKDD1AQ495B1 522 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 RAET1GQ6H3X3 334 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 CCDC71Q8IV32 467 aaPredicted RBP16.89■□□□□ 0.29
USH1C-205ENST00000527020 CELF5Q8N6W0 485 aaKnown RBP16.89■□□□□ 0.29
USH1C-205ENST00000527020 SETD9Q8NE22 299 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 GOT1L1Q8NHS2 421 aaPredicted RBP16.89■□□□□ 0.29
USH1C-205ENST00000527020 FAM81AQ8TBF8 368 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 REPS1Q96D71 796 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 CXorf40BQ96DE9 158 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 ASPSCR1Q9BZE9 553 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 BHLHE41Q9C0J9 482 aaPredicted RBP16.89■□□□□ 0.29
USH1C-205ENST00000527020 REEP4Q9H6H4 257 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 THUMPD1Q9NXG2 353 aaKnown RBP16.89■□□□□ 0.29
USH1C-205ENST00000527020 BAG5Q9UL15 447 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 FAF1Q9UNN5 650 aaPredicted RBP16.89■□□□□ 0.29
USH1C-205ENST00000527020 CORO2BQ9UQ03 480 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 MRPS23Q9Y3D9 190 aaKnown RBP16.89■□□□□ 0.29
USH1C-205ENST00000527020 PCDHGB1Q9Y5G3 927 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 PCYT1BQ9Y5K3 369 aaPredicted RBP16.89■□□□□ 0.29
USH1C-205ENST00000527020 SNX5Q9Y5X3 404 aa16.89■□□□□ 0.29
USH1C-205ENST00000527020 KLHL33A6NCF5 533 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 OTOL1A6NHN0 477 aaPredicted RBP16.88■□□□□ 0.29
USH1C-205ENST00000527020 SAP18O00422 153 aaKnown RBP16.88■□□□□ 0.29
USH1C-205ENST00000527020 MMP20O60882 483 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 JUNDP17535 347 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 ACADLP28330 430 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 GPR1P46091 355 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 EMX1Q04741 257 aaPredicted RBP16.88■□□□□ 0.29
USH1C-205ENST00000527020 PRSS53Q2L4Q9 553 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 ZNF765Q7L2R6 523 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 CROCCP3Q8IVE0 287 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 TTC29Q8NA56 475 aaPredicted RBP16.88■□□□□ 0.29
USH1C-205ENST00000527020 TMIEQ8NEW7 156 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 FAR1Q8WVX9 515 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 ZFYVE19Q96K21 471 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 EFCAB11Q9BUY7 163 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 OR51B5Q9H339 312 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 REEP1Q9H902 201 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 ERVK-18Q9QC07 812 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 ZNF282Q9UDV7 671 aaPredicted RBP16.88■□□□□ 0.29
USH1C-205ENST00000527020 DYRK1BQ9Y463 629 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 HSPE1-MOB4S4R3N1 261 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 TGFB1P01137 390 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 FURINP09958 794 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 MLLT10P55197 1068 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 CASP9P55211 416 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 SLC35A2P78381 396 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 PDE7AQ13946 482 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 HNRNPA1L2Q32P51 320 aaKnown RBP16.88■□□□□ 0.29
USH1C-205ENST00000527020 IER5LQ5T953 404 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 FNDC8Q8TC99 324 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 CIDECQ96AQ7 238 aaPredicted RBP16.88■□□□□ 0.29
USH1C-205ENST00000527020 LINC00615Q96LM1 132 aaPredicted RBP16.88■□□□□ 0.29
USH1C-205ENST00000527020 ZCCHC2Q9C0B9 1178 aaKnown RBP16.88■□□□□ 0.29
USH1C-205ENST00000527020 EHD1Q9H4M9 534 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 DUSP21Q9H596 190 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 TRIM39Q9HCM9 518 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 PRM3Q9NNZ6 103 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 RAPGEFL1Q9UHV5 662 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 GMPPBQ9Y5P6 360 aa16.88■□□□□ 0.29
USH1C-205ENST00000527020 ALPK3Q96L96 1907 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 SH3PXD2BA1X283 911 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 SUV39H1O43463 412 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 TNFRSF21O75509 655 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 C6orf47O95873 294 aa16.87■□□□□ 0.29
USH1C-205ENST00000527020 ADH1CP00326 375 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms