RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 ARHGEF39Q8N4T4 335 aa15.75■□□□□ 0.11
CAPN1-205ENST00000526954 CMTM7Q96FZ5 175 aa15.75■□□□□ 0.11
CAPN1-205ENST00000526954 TEFMQ96QE5 360 aaKnown RBP15.75■□□□□ 0.11
CAPN1-205ENST00000526954 MS4A8Q9BY19 250 aa15.75■□□□□ 0.11
CAPN1-205ENST00000526954 CCDC134Q9H6E4 229 aa15.75■□□□□ 0.11
CAPN1-205ENST00000526954 BRF2Q9HAW0 419 aa15.75■□□□□ 0.11
CAPN1-205ENST00000526954 DMRT3Q9NQL9 472 aa15.75■□□□□ 0.11
CAPN1-205ENST00000526954 STARD5Q9NSY2 213 aa15.75■□□□□ 0.11
CAPN1-205ENST00000526954 PISDQ9UG56 409 aa15.75■□□□□ 0.11
CAPN1-205ENST00000526954 RUVBL1Q9Y265 456 aaKnown RBP15.75■□□□□ 0.11
CAPN1-205ENST00000526954 PCDHB3Q9Y5E6 796 aa15.75■□□□□ 0.11
CAPN1-205ENST00000526954 HYKKA2RU49 373 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 LRIT2A6NDA9 550 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 MAGEB17A8MXT2 336 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 PDYNP01213 254 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 HSD3B1P14060 373 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 PTX3P26022 381 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-205ENST00000526954 HSD3B2P26439 372 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 RPL14P50914 215 aaKnown RBP15.74■□□□□ 0.11
CAPN1-205ENST00000526954 NEK2P51955 445 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 MAPK10P53779 464 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 ARSFP54793 590 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 CYP4F2P78329 520 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 GABREP78334 506 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 RTP5Q14D33 572 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 FAM214AQ32MH5 1076 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 TCHHL1Q5QJ38 904 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-205ENST00000526954 TMEM164Q5U3C3 297 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 CLEC6AQ6EIG7 209 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 PWWP2BQ6NUJ5 590 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 TMEM214Q6NUQ4 689 aaKnown RBP15.74■□□□□ 0.11
CAPN1-205ENST00000526954 ZNF781Q8N8C0 355 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 TTC29Q8NA56 475 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-205ENST00000526954 SELENOMQ8WWX9 145 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 C7orf26Q96N11 449 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 SLC46A1Q96NT5 459 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 MTERF1Q99551 399 aaKnown RBP15.74■□□□□ 0.11
CAPN1-205ENST00000526954 CTRCQ99895 268 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 MACROD1Q9BQ69 325 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 FARSBQ9NSD9 589 aaKnown RBP15.74■□□□□ 0.11
CAPN1-205ENST00000526954 IRAK4Q9NWZ3 460 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 KLK13Q9UKR3 277 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 SRPK3Q9UPE1 567 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 NEUROG3Q9Y4Z2 214 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 DNAJC15Q9Y5T4 150 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 B3GALT1Q9Y5Z6 326 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 SLC22A7Q9Y694 548 aa15.74■□□□□ 0.11
CAPN1-205ENST00000526954 URADA6NGE7 173 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 C9orf172C9J069 976 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 NVLO15381 856 aaKnown RBP15.73■□□□□ 0.11
CAPN1-205ENST00000526954 ZNF749O43361 778 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 SCRG1O75711 98 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 DXOO77932 396 aaKnown RBP15.73■□□□□ 0.11
CAPN1-205ENST00000526954 TNFSF15O95150 251 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 CHEK2O96017 543 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 STATHP02808 62 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 SERPIND1P05546 499 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 SMIM10L1P0DMW3 83 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 SERPINB3P29508 390 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 HTR6P50406 440 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 ARFIP1P53367 373 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 STXBP1P61764 594 aaKnown RBP15.73■□□□□ 0.11
CAPN1-205ENST00000526954 RPS13P62277 151 aaKnown RBP15.73■□□□□ 0.11
CAPN1-205ENST00000526954 GUCY1A3Q02108 690 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 CSTF3Q12996 717 aaKnown RBP15.73■□□□□ 0.11
CAPN1-205ENST00000526954 CUL3Q13618 768 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 DDX39BQ13838 428 aaKnown RBP15.73■□□□□ 0.11
CAPN1-205ENST00000526954 FAM53BQ14153 422 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 ABRAXAS2Q15018 415 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 NDUFA9Q16795 377 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 TMEM35AQ53FP2 167 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 DEPDC1Q5TB30 811 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 FAM219BQ5XKK7 198 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 FOXR1Q6PIV2 292 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 CHSY3Q70JA7 882 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 TRIM46Q7Z4K8 759 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 TMEM126BQ8IUX1 230 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 GBP7Q8N8V2 638 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-205ENST00000526954 KCT2Q8NC54 265 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 CCT6BQ92526 530 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 PMEPA1Q969W9 287 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 MTFMTQ96DP5 389 aaKnown RBP15.73■□□□□ 0.11
CAPN1-205ENST00000526954 SMIM10Q96HG1 83 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 FAR2Q96K12 515 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 C10orf90Q96M02 699 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 SCNM1Q9BWG6 230 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 AICDAQ9GZX7 198 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 PCDHGA7Q9Y5G6 932 aa15.73■□□□□ 0.11
CAPN1-205ENST00000526954 CDRT15L2A8MXV6 281 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 TMEM233B4DJY2 109 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 TIAF1O95411 115 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 TGFB1P01137 390 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 ADRB1P08588 477 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 HBQ1P09105 142 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 HNRNPH1P31943 449 aaKnown RBP15.72■□□□□ 0.11
CAPN1-205ENST00000526954 MUM1Q2TAK8 710 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 SGO1Q5FBB7 561 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 TOR1AIP1Q5JTV8 583 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 PRAMEF17Q5VTA0 474 aa15.72■□□□□ 0.11
CAPN1-205ENST00000526954 KHDRBS2Q5VWX1 349 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms