RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 CFAP157Q5JU67 520 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 NIPAL1Q6NVV3 410 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 MILR1Q7Z6M3 343 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 CACNA2D3Q8IZS8 1091 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 CCNYL1Q8N7R7 359 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 OR7G3Q8NG95 312 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 KCNE4Q8WWG9 221 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 KCNK9Q9NPC2 374 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 LHX9Q9NQ69 397 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 PSD3Q9NYI0 1048 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 CDC14AQ9UNH5 594 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 SSUH2Q9Y2M2 353 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 RNF11Q9Y3C5 154 aa19.76■□□□□ 0.75
CD44-222ENST00000526025 TMEM120BA0PK00 339 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 ATP8B1O43520 1251 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 NPHS1O60500 1241 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 ENO1P06733 434 aaKnown RBP19.75■□□□□ 0.75
CD44-222ENST00000526025 AGXTP21549 392 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 EIF2S3P41091 472 aaKnown RBP19.75■□□□□ 0.75
CD44-222ENST00000526025 STXBP1P61764 594 aaKnown RBP19.75■□□□□ 0.75
CD44-222ENST00000526025 GALNT1Q10472 559 aaPredicted RBP19.75■□□□□ 0.75
CD44-222ENST00000526025 CLN3Q13286 438 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 MPP2Q14168 576 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 ADPRMQ3LIE5 342 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 GPRIN3Q6ZVF9 776 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 TTLL10Q6ZVT0 673 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 VN1R5Q7Z5H4 357 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 AFAP1L2Q8N4X5 818 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 OR4F6Q8NGB9 312 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 OR6Y1Q8NGX8 325 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 TRPC4APQ8TEL6 797 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 CNDP1Q96KN2 507 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 SLC29A3Q9BZD2 475 aa19.75■□□□□ 0.75
CD44-222ENST00000526025 C21orf140B9A014 251 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 ESRRBO95718 433 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 PIM1P11309 404 aaPredicted RBP19.74■□□□□ 0.75
CD44-222ENST00000526025 ARL1P40616 181 aaPredicted RBP19.74■□□□□ 0.75
CD44-222ENST00000526025 SKP1P63208 163 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 PHEXP78562 749 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 DCDP81605 110 aaKnown RBP19.74■□□□□ 0.75
CD44-222ENST00000526025 HYAL2Q12891 473 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 HERC3Q15034 1050 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 TTMPQ5BVD1 217 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 LETMD1Q6P1Q0 360 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 RPS27LQ71UM5 84 aaKnown RBP19.74■□□□□ 0.75
CD44-222ENST00000526025 ABHD13Q7L211 337 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 MYLK4Q86YV6 388 aaPredicted RBP19.74■□□□□ 0.75
CD44-222ENST00000526025 WDR20Q8TBZ3 569 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 AGAP11Q8TF27 550 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 ZNF473Q8WTR7 871 aaKnown RBP19.74■□□□□ 0.75
CD44-222ENST00000526025 ZBTB9Q96C00 473 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 MOCOSQ96EN8 888 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 EFHD1Q9BUP0 239 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 GATA5Q9BWX5 397 aaPredicted RBP19.74■□□□□ 0.75
CD44-222ENST00000526025 DHCR7Q9UBM7 475 aaKnown RBP19.74■□□□□ 0.75
CD44-222ENST00000526025 ZNF225Q9UK10 706 aa19.74■□□□□ 0.75
CD44-222ENST00000526025 LRIT2A6NDA9 550 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 H0YIG0 161 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 FOXE1O00358 373 aaPredicted RBP19.73■□□□□ 0.75
CD44-222ENST00000526025 RRP8O43159 456 aaKnown RBP19.73■□□□□ 0.75
CD44-222ENST00000526025 MED26O95402 600 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 NSA2O95478 260 aaKnown RBP19.73■□□□□ 0.75
CD44-222ENST00000526025 TBX6O95947 436 aaPredicted RBP19.73■□□□□ 0.75
CD44-222ENST00000526025 CD63P08962 238 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 RAB40ALP0C0E4 278 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 ARFIP1P53367 373 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 CYP4F2P78329 520 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 ZNF33BQ06732 778 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 ZRSR2Q15696 482 aaKnown RBP19.73■□□□□ 0.75
CD44-222ENST00000526025 CPSF6Q16630 551 aaKnown RBP eCLIP19.73■□□□□ 0.75
CD44-222ENST00000526025 IL22RA1Q8N6P7 574 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 KCT2Q8NC54 265 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 GAL3ST3Q96A11 431 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 FKBP10Q96AY3 582 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 CDK15Q96Q40 435 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 MECRQ9BV79 373 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 CLK4Q9HAZ1 481 aaKnown RBP19.73■□□□□ 0.75
CD44-222ENST00000526025 NKIRAS1Q9NYS0 192 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 PCDHGA6Q9Y5G7 932 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 SCN3AQ9NY46 2000 aa19.73■□□□□ 0.75
CD44-222ENST00000526025 A0A087WV48 116 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 A0A1B0GTL3 188 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 TEX51A0A1B0GUA7 166 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 PPP6CO00743 305 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 TERTO14746 1132 aaKnown RBP19.72■□□□□ 0.75
CD44-222ENST00000526025 FOXS1O43638 330 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 SERPIND1P05546 499 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 SMIM10L1P0DMW3 83 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 TSPAN8P19075 237 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 ALAS2P22557 587 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 NKAIN1Q4KMZ8 207 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 TMEM35AQ53FP2 167 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 FRG2Q64ET8 278 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 SYVN1Q86TM6 617 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 NUDCD3Q8IVD9 361 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 SRFBP1Q8NEF9 429 aaKnown RBP19.72■□□□□ 0.75
CD44-222ENST00000526025 HUS1BQ8NHY5 278 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 MR1Q95460 341 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 MS4A6EQ96DS6 147 aa19.72■□□□□ 0.75
CD44-222ENST00000526025 CMTM7Q96FZ5 175 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms