RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 FAM25AB3EWG3 89 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 FAM25CB3EWG5 89 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 FAM25GB3EWG6 89 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 GFYI3L273 518 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 SCAMP2O15127 329 aaKnown RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 COX7A2P14406 83 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 BPIP17213 487 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 ATF6P18850 670 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 TWF1Q12792 350 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 ASAH1Q13510 395 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 PTPRRQ15256 657 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 CCL14Q16627 93 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 ZXDCQ2QGD7 858 aaPredicted RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 KIAA1841Q6NSI8 718 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 FAM92BQ6ZTR7 304 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 CLDN19Q8N6F1 224 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 WDR20Q8TBZ3 569 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 TPD52L3Q96J77 140 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 RNF170Q96K19 258 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 DUSP26Q9BV47 211 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 TMEM38AQ9H6F2 299 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 MARCH7Q9H992 704 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 SLC25A19Q9HC21 320 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 RAD18Q9NS91 495 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 TMEM184CQ9NVA4 438 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 VPS29Q9UBQ0 182 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 SEC14L4Q9UDX3 406 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 CRLS1Q9UJA2 301 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 FNDC3AQ9Y2H6 1198 aaKnown RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 OR51B4Q9Y5P0 310 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 V9GYH0 126 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 A0A0U1RQS6 177 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 RNASET2O00584 256 aaKnown RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 LRATO95237 230 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 COL6A1P12109 1028 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 RFX2P48378 723 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 RHOAP61586 193 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 SNRPGP62308 76 aaKnown RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 C19orf57Q0VDD7 668 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 TMEM201Q5SNT2 666 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 UBE2R2Q712K3 238 aaPredicted RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 SPATC1Q76KD6 591 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 NRARPQ7Z6K4 114 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 TTC9Q92623 222 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 KIAA1143Q96AT1 154 aaPredicted RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 RIPOR3Q96MK2 946 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 PTPN18Q99952 460 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 RNF167Q9H6Y7 350 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 ZNF556Q9HAH1 456 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 IMPAD1Q9NX62 359 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 MS4A12Q9NXJ0 267 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 LSM2Q9Y333 95 aaKnown RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 HCN4Q9Y3Q4 1203 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 CTDSP2O14595 271 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 TRIM3O75382 744 aaPredicted RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 STC2O76061 302 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 KLKB1P03952 638 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 YES1P07947 543 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 SRPRAP08240 638 aaKnown RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 HIST1H2AGP0C0S8 130 aaPredicted RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 HIST1H2ADP20671 130 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 CBLP22681 906 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 OR1G1P47890 313 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 RORCP51449 518 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 ARPC4P59998 168 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 FKBP1BP68106 108 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 NCF4Q15080 339 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 CHRNA6Q15825 494 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 SSX1Q16384 188 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 CLLU1OSQ5K130 101 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 PLEKHS1Q5SXH7 462 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 MBOAT1Q6ZNC8 495 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 Q6ZPB1 254 aaPredicted RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 DENND1CQ8IV53 801 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 RDH10Q8IZV5 341 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 LGI4Q8N135 537 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 PSD4Q8NDX1 1056 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 HIST1H2AHQ96KK5 128 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 PHOX2BQ99453 314 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 HIST1H2AJQ99878 128 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 DPH2Q9BQC3 489 aaPredicted RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 H2AFJQ9BTM1 129 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 SRRQ9GZT4 340 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 CRISPLD1Q9H336 500 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 CLN6Q9NWW5 311 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 TBC1D14Q9P2M4 693 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 FTSJ1Q9UET6 329 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 TSR3Q9UJK0 312 aaKnown RBP7.7□□□□□ -1.18
BDNF-213ENST00000525950 VPS4AQ9UN37 437 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 DUSP12Q9UNI6 340 aa7.7□□□□□ -1.18
BDNF-213ENST00000525950 DOCK3Q8IZD9 2030 aa7.69□□□□□ -1.18
BDNF-213ENST00000525950 H0YIV9 168 aa7.69□□□□□ -1.18
BDNF-213ENST00000525950 YY2O15391 372 aa7.69□□□□□ -1.18
BDNF-213ENST00000525950 PRAMEF4O60810 478 aa7.69□□□□□ -1.18
BDNF-213ENST00000525950 GUCY1B2O75343 617 aa7.69□□□□□ -1.18
BDNF-213ENST00000525950 TNFRSF21O75509 655 aa7.69□□□□□ -1.18
BDNF-213ENST00000525950 GPX5O75715 221 aa7.69□□□□□ -1.18
BDNF-213ENST00000525950 CPSF4O95639 269 aaKnown RBP7.69□□□□□ -1.18
BDNF-213ENST00000525950 ALPPP05187 535 aa7.69□□□□□ -1.18
BDNF-213ENST00000525950 SGSHP51688 502 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms