RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 DCTP40126 519 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 SLC1A4P43007 532 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 CCR10P46092 362 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 PPP5CP53041 499 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 CDR2Q01850 454 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 TRDNQ13061 729 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 COG2Q14746 738 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 GTDC1Q4AE62 458 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 PHLDA2Q53GA4 152 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 KLHL26Q53HC5 615 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 TCTE1Q5JU00 501 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 LINGO4Q6UY18 593 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 CCDC186Q7Z3E2 898 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 TMPRSS11BQ86T26 416 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 IQCA1Q86XH1 822 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 EID3Q8N140 333 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 CAMKVQ8NCB2 501 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 NPEPL1Q8NDH3 523 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 GPRC5AQ8NFJ5 357 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 FCAMRQ8WWV6 532 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 SUSD6Q92537 303 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 MOB3AQ96BX8 217 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 DHX58Q96C10 678 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 TCEANC2Q96MN5 208 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 GBP5Q96PP8 586 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 DUX3Q96PT4 197 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 UBAC1Q9BSL1 405 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 PORCNQ9H237 461 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 CPVLQ9H3G5 476 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 MYNNQ9NPC7 610 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 PPANQ9NQ55 473 aaKnown RBP3.52□□□□□ -1.85
CD44-219ENST00000525685 PRMT7Q9NVM4 692 aaPredicted RBP3.52□□□□□ -1.85
CD44-219ENST00000525685 DAPK2Q9UIK4 370 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 MTUS1Q9ULD2 1270 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 RNF150Q9ULK6 438 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 ISY1Q9ULR0 285 aaKnown RBP3.52□□□□□ -1.85
CD44-219ENST00000525685 WDR19Q8NEZ3 1342 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 LCTP09848 1927 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 IGLV9-49A0A0B4J1Y8 123 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 LOC101059948A0A1B0GTJ6 334 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 A0A1W2PN81 502 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 PRR23AA6NEV1 266 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 NEMP2A6NFY4 417 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 TRIM77I1YAP6 450 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 CLDN4O14493 209 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 ZNF197O14709 1029 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 IFIT3O14879 490 aaKnown RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 TBX10O75333 385 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 TBCAO75347 108 aaKnown RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 SLCO2B1O94956 709 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 WDPCPO95876 746 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 TSHBP01222 138 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 GOLGA8HP0CJ92 632 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 CDH3P22223 829 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 ACHEP22303 614 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 SP100P23497 879 aaPredicted RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 CHRNA7P36544 502 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 ASCL1P50553 236 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 PRMT2P55345 433 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 SNAP25P60880 206 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 ACSM1Q08AH1 577 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 VEZF1Q14119 521 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 KIAA1644Q3SXP7 199 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 SYT14P1Q58G82 188 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 KRBOX4Q5JUW0 171 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 SNRNP48Q6IEG0 339 aaKnown RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 FAM198BQ6UWH4 519 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 MARK2Q7KZI7 788 aaKnown RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 GPR142Q7Z601 462 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 RTN4RL2Q86UN3 420 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 NUDT13Q86X67 352 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 LGI2Q8N0V4 545 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 RYBPQ8N488 228 aaPredicted RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 THAP8Q8NA92 274 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 FGFBP3Q8TAT2 258 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 ROBO4Q8WZ75 1007 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 CENPTQ96BT3 561 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 ZNF524Q96C55 264 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 OTUB1Q96FW1 271 aaPredicted RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 LINC00615Q96LM1 132 aaPredicted RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 JAKMIP1Q96N16 626 aaKnown RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 RAB3IPQ96QF0 476 aaPredicted RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 NAA11Q9BSU3 229 aaPredicted RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 GTPBP2Q9BX10 602 aaKnown RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 TEX13BQ9BXU2 312 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 LRRC2Q9BYS8 371 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 FAM49AQ9H0Q0 323 aaPredicted RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 ERVMER34-1Q9H9K5 563 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 LY9Q9HBG7 655 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 SLC38A10Q9HBR0 1119 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 FLRT3Q9NZU0 649 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 ZNF624Q9P2J8 865 aaPredicted RBP3.51□□□□□ -1.85
CD44-219ENST00000525685 TMED3Q9Y3Q3 217 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 CCL27Q9Y4X3 112 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 FRMPD3Q5JV73 1810 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 NID2Q14112 1375 aa3.51□□□□□ -1.85
CD44-219ENST00000525685 PLXNA1Q9UIW2 1896 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 ARHGEF37A1IGU5 675 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 ERICH2A1L162 156 aa3.5□□□□□ -1.85
CD44-219ENST00000525685 CCDC69A6NI79 296 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms