RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SPAG16Q8N0X2 631 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 DEPDC4Q8N2C3 294 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 GPR137CQ8N3F9 429 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 SYT14Q8NB59 555 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TMEM145Q8NBT3 493 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 CLRN3Q8NCR9 226 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 NUDT10Q8NFP7 164 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 OR10A7Q8NGE5 316 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 CPT1CQ8TCG5 803 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 MRGPRDQ8TDS7 321 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 C5orf34Q96MH7 638 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TAAR6Q96RI8 345 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ZNF559Q9BR84 538 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 PYM1Q9BRP8 204 aaKnown RBP7.28□□□□□ -1.24
HDAC3-216ENST00000523088 C1orf50Q9BV19 199 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 DGCR6LQ9BY27 220 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ANGPTL4Q9BY76 406 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 MRPL13Q9BYD1 178 aaKnown RBP7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TRIM9Q9C026 710 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ADAM19Q9H013 955 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 CDT1Q9H211 546 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 MFSD1Q9H3U5 465 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 SMOC1Q9H4F8 434 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ZDHHC4Q9NPG8 344 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 NANSQ9NR45 359 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ACOXLQ9NUZ1 547 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TMEM140Q9NV12 185 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 FAM86C1Q9NVL1 165 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 IMPAD1Q9NX62 359 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 MIOSQ9NXC5 875 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 PLEK2Q9NYT0 353 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ACTR10Q9NZ32 417 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 KLK14Q9P0G3 267 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TMEM9Q9P0T7 183 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 C5AR2Q9P296 337 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 NDRG3Q9UGV2 375 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 NAGKQ9UJ70 344 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 HAO1Q9UJM8 370 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 KCNH3Q9ULD8 1083 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 MAP4K5Q9Y4K4 846 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 ATP23Q9Y6H3 246 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 MIA3Q5JRA6 1907 aa7.28□□□□□ -1.24
HDAC3-216ENST00000523088 TCHHQ07283 1943 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 SMIM28A0A1B0GU29 152 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 A0A1B0GVM2 712 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 TRBC2A0A5B9 178 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 GRID2IPA4D2P6 1211 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 A6NIZ1 184 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 F8VP50 259 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 CCDC188H7C350 402 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 NR5A2O00482 541 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 PLD2O14939 933 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 HNRNPDLO14979 420 aaKnown RBP7.27□□□□□ -1.25
HDAC3-216ENST00000523088 PSMD3O43242 534 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 MITFO75030 526 aaPredicted RBP7.27□□□□□ -1.25
HDAC3-216ENST00000523088 ATP2C2O75185 946 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 BANF1O75531 89 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 STX11O75558 287 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 ITGA10O75578 1167 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 SEC24AO95486 1093 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 ANGPTL1O95841 491 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 PIGRP01833 764 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 SERPING1P05155 500 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 TPOP07202 933 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 C8AP07357 584 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 INHBAP08476 426 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 CD48P09326 243 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 MAPTP10636 758 aaKnown RBP7.27□□□□□ -1.25
HDAC3-216ENST00000523088 F3P13726 295 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 DDX6P26196 483 aaKnown RBP eCLIP7.27□□□□□ -1.25
HDAC3-216ENST00000523088 PCSK6P29122 969 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 PTPN6P29350 595 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 OR1E1P30953 314 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 HNRNPH3P31942 346 aaKnown RBP7.27□□□□□ -1.25
HDAC3-216ENST00000523088 CCR7P32248 378 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 MAGEB1P43366 347 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 NSFP46459 744 aaKnown RBP7.27□□□□□ -1.25
HDAC3-216ENST00000523088 ALDH9A1P49189 494 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 MAP2K6P52564 334 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 PRKAG1P54619 331 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 CXCR4P61073 352 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 COPZ1P61923 177 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 ESRRGP62508 458 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 CSNK1G2P78368 415 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 NHLH1Q02575 133 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 LRRC63Q05C16 580 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 SPOCK1Q08629 439 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 EPS8Q12929 822 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 SRSF5Q13243 272 aaKnown RBP7.27□□□□□ -1.25
HDAC3-216ENST00000523088 ALCAMQ13740 583 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 NCOA4Q13772 614 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 PTGR1Q14914 329 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 DUOXA2Q1HG44 320 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 GOLGA7BQ2TAP0 167 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 ARHGAP40Q5TG30 622 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 IZUMO3Q5VZ72 239 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 FAM91A1Q658Y4 838 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 KRT39Q6A163 491 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 FRMPD2BQ6IN97 320 aa7.27□□□□□ -1.25
HDAC3-216ENST00000523088 SLC8B1Q6J4K2 584 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms