RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PRR23CQ6ZRP0 262 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 TRPM8Q7Z2W7 1104 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 KMT5CQ86Y97 462 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 NAXDQ8IW45 347 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 FNDC5Q8NAU1 212 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 NT5CQ8TCD5 201 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 MTFMTQ96DP5 389 aaKnown RBP12.49□□□□□ -0.41
CPNE3-205ENST00000522240 CNDP2Q96KP4 475 aaKnown RBP12.49□□□□□ -0.41
CPNE3-205ENST00000522240 PPM1MQ96MI6 270 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 TGM7Q96PF1 710 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 MAP3K3Q99759 626 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 NMUR2Q9GZQ4 415 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 PARD6AQ9NPB6 346 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 SAR1AQ9NR31 198 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 SIRT5Q9NXA8 310 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 NOP53Q9NZM5 478 aaKnown RBP12.49□□□□□ -0.41
CPNE3-205ENST00000522240 FTSJ1Q9UET6 329 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 SLC12A4Q9UP95 1085 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 KLHL20Q9Y2M5 609 aa12.49□□□□□ -0.41
CPNE3-205ENST00000522240 GOLGA4Q13439 2230 aaKnown RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 LCMT2O60294 686 aaKnown RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 CTSVO60911 334 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 PEX11AO75192 247 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 ETHE1O95571 254 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 CPNE6O95741 557 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 ALDOCP09972 364 aaKnown RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 IDO1P14902 403 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 NCF2P19878 526 aaPredicted RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 ACP1P24666 158 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 PTX3P26022 381 aaPredicted RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 MAPK1P28482 360 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 STX1BP61266 288 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 RPL38P63173 70 aaKnown RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 CYP4F2P78329 520 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 CFHR1Q03591 330 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 CYP4F3Q08477 520 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 PWP1Q13610 501 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 SQLEQ14534 574 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 KIAA0040Q15053 153 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 ZIC1Q15915 447 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 ADPRMQ3LIE5 342 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 AASDHQ4L235 1098 aaPredicted RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 TMEM35AQ53FP2 167 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 ZC3H12BQ5HYM0 836 aaKnown RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 KHDRBS2Q5VWX1 349 aaKnown RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 NKAIN2Q5VXU1 208 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 TMEM198Q66K66 360 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 C6orf89Q6UWU4 347 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 FAM92BQ6ZTR7 304 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 CLNKQ7Z7G1 428 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 MTDHQ86UE4 582 aaKnown RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 PLD3Q8IV08 490 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 RNF175Q8N4F7 328 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 CPSF7Q8N684 471 aaKnown RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 Q8N9G6 341 aaPredicted RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 WDR48Q8TAF3 677 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 CREB3L4Q8TEY5 395 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 ERP27Q96DN0 273 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 C11orf24Q96F05 449 aaPredicted RBP12.48□□□□□ -0.41
CPNE3-205ENST00000522240 TCTN2Q96GX1 697 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 CATSPER2Q96P56 530 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 OR2A5Q96R48 311 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 CENPKQ9BS16 269 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 BRINP2Q9C0B6 783 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 LRRN3Q9H3W5 708 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 AIG1Q9NVV5 245 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 GIMAP2Q9UG22 337 aa12.48□□□□□ -0.41
CPNE3-205ENST00000522240 ADAMTS20P59510 1910 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 EBAG9O00559 213 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 NDUFS4O43181 175 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 SEC22BO75396 215 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 ZBTB11O95625 1053 aaPredicted RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 TBX6O95947 436 aaPredicted RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 TGFB1P01137 390 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 RPLP0P05388 317 aaKnown RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 ANKRD34CP0C6C1 535 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 SLC35G6P0C7Q6 338 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 TGM1P22735 817 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 STXBP1P61764 594 aaKnown RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 RGS1Q08116 209 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 ACSM2AQ08AH3 577 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 TBL3Q12788 808 aaKnown RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 RSPO4Q2I0M5 234 aaPredicted RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 AMZ1Q400G9 498 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 PDCD4Q53EL6 469 aaKnown RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 MANEAQ5SRI9 462 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 DEPDC1Q5TB30 811 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 ACSM2BQ68CK6 577 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 TMEM71Q6P5X7 295 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 GALNT18Q6P9A2 607 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 VN1R4Q7Z5H5 301 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 ASPGQ86U10 573 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 FAM9CQ8IZT9 166 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 METTL4Q8N3J2 472 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 FITM2Q8N6M3 262 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 ZNF655Q8N720 491 aaPredicted RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 OR4D9Q8NGE8 314 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 RHBDD1Q8TEB9 315 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 CHTF18Q8WVB6 975 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 TM4SF19Q96DZ7 209 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms