RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	HSCB	Q8IWL3	235 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	LMNTD2	Q8IXW0	634 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	NAGS	Q8N159	534 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	TMEM99	Q8N816	258 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	ZNF383	Q8NA42	475 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	SIDT2	Q8NBJ9	832 aa	Known RBP	4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	ZBTB44	Q8NCP5	570 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	ULK4	Q96C45	1275 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	MRPL38	Q96DV4	380 aa	Known RBP	4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	SAMD8	Q96LT4	415 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	NSMCE2	Q96MF7	247 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	RPF1	Q9H9Y2	349 aa	Known RBP	4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	PIGV	Q9NUD9	493 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	FLRT3	Q9NZU0	649 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	IL36A	Q9UHA7	158 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	MAN1B1	Q9UKM7	699 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	FAF1	Q9UNN5	650 aa	Predicted RBP	4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	TNN	Q9UQP3	1299 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	EVPL	Q92817	2033 aa		4.54	□□□□□ -1.68
CTNNA1-233	ENST00000522052	PLSCR5	A0PG75	271 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	MACROD2	A1Z1Q3	448 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	C16orf97	H3BN30	126 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	CPLX1	O14810	134 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	DFFB	O76075	338 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	TGFA	P01135	160 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	CXCL10	P02778	98 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	ATP1B1	P05026	303 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	PGK2	P07205	417 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	ASMT	P46597	345 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	CLCN4	P51793	760 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	HSD17B7	P56937	341 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	SQLE	Q14534	574 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	XKR6	Q5GH73	641 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	SLC25A53	Q5H9E4	307 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	OR6B2	Q6IFH4	312 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	WDR88	Q6ZMY6	472 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	ISCA2	Q86U28	154 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	NFE4	Q86UQ8	179 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	STH	Q8IWL8	128 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	GBP7	Q8N8V2	638 aa	Predicted RBP	4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	OR7A2P	Q8NGA2	310 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	OR4C15	Q8NGM1	316 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	HAS2	Q92819	552 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	MED30	Q96HR3	178 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	GUCD1	Q96NT3	240 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	C1QTNF4	Q9BXJ3	329 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	GPN1	Q9HCN4	374 aa	Predicted RBP	4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	CD93	Q9NPY3	652 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	TMOD3	Q9NYL9	352 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	SH3BGRL2	Q9UJC5	107 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	NCKAP1	Q9Y2A7	1128 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	PLEKHA6	Q9Y2H5	1048 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	SH3GLB1	Q9Y371	365 aa		4.53	□□□□□ -1.68
CTNNA1-233	ENST00000522052	ATP8B3	O60423	1300 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052		K7EPI3	171 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	NDC80	O14777	642 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	SSX5	O60225	188 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	SOCS5	O75159	536 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	GLRA3	O75311	464 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	ATP6V1G1	O75348	118 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	CLN5	O75503	358 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	STBD1	O95210	358 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	TSHB	P01222	138 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	ALPL	P05186	524 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	NUDT17	P0C025	328 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	FRMD6-AS1	P0C7T7	363 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	CETP	P11597	493 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	CYP3A5	P20815	502 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	RBMS1	P29558	406 aa	Known RBP	4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	ZNF131	P52739	623 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	MYL7	Q01449	175 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	GPR17	Q13304	367 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	RBM39	Q14498	530 aa	Known RBP	4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	PTPN14	Q15678	1187 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	EPC2	Q52LR7	807 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	TAF1B	Q53T94	588 aa	Predicted RBP	4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	LCN1P1	Q5VSP4	162 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	PRAMEF7	Q5VXH5	474 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	FOXL2NB	Q6ZUU3	175 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	G2E3	Q7L622	706 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	TAF8	Q7Z7C8	310 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	KBTBD3	Q8NAB2	608 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	OR13A1	Q8NGR1	328 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	OR4A16	Q8NH70	328 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	SEPT8	Q92599	483 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	NTMT1	Q9BV86	223 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	LRRC2	Q9BYS8	371 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	POLE3	Q9NRF9	147 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	EXOC1	Q9NV70	894 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	OR6C2	Q9NZP2	312 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	RNF7	Q9UBF6	113 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	AURKC	Q9UQB9	309 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	KIAA1217	Q5T5P2	1943 aa		4.52	□□□□□ -1.69
CTNNA1-233	ENST00000522052	FAM205A	Q6ZU69	1335 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms