RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 CCDC157Q569K6 752 aa21.21■□□□□ 0.99
PTP4A3-204ENST00000521578 MBOAT1Q6ZNC8 495 aa21.21■□□□□ 0.99
PTP4A3-204ENST00000521578 DPP10Q8N608 796 aa21.21■□□□□ 0.99
PTP4A3-204ENST00000521578 TMEM102Q8N9M5 508 aaPredicted RBP21.21■□□□□ 0.99
PTP4A3-204ENST00000521578 USP7Q93009 1102 aa21.21■□□□□ 0.99
PTP4A3-204ENST00000521578 VPS33AQ96AX1 596 aa21.21■□□□□ 0.99
PTP4A3-204ENST00000521578 COPS7BQ9H9Q2 264 aaPredicted RBP21.21■□□□□ 0.99
PTP4A3-204ENST00000521578 RNF11Q9Y3C5 154 aa21.21■□□□□ 0.99
PTP4A3-204ENST00000521578 MAGEA13PA6NCF6 341 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 MANBAO00462 879 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 CASC3O15234 703 aaKnown RBP21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 TNFSF14O43557 240 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 SMNDC1O75940 238 aaKnown RBP eCLIP21.2■□□□□ 0.984e-7■■■■■ 30.5
PTP4A3-204ENST00000521578 STAMBPO95630 424 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 EPORP19235 508 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 PPM1FP49593 454 aaPredicted RBP21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 MAD2L1Q13257 205 aaPredicted RBP21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 TRIP6Q15654 476 aaKnown RBP21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 RSPO4Q2I0M5 234 aaPredicted RBP21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 PAGE3Q5JUK9 113 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 IL23RQ5VWK5 629 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 CYP20A1Q6UW02 462 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 ZNF438Q7Z4V0 828 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 GOLM1Q8NBJ4 401 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 ZFPM2Q8WW38 1151 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 LCN9Q8WX39 176 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 TMEM125Q96AQ2 219 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 RAD51AP1Q96B01 352 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 SLC45A3Q96JT2 553 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 ACTL8Q9H568 366 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 XKR8Q9H6D3 395 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 ASIC5Q9NY37 505 aa21.2■□□□□ 0.98
PTP4A3-204ENST00000521578 ULK1O75385 1050 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 CLDN9O95484 217 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 G6PDP11413 515 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 JAK1P23458 1154 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 ACP1P24666 158 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 SLC6A12P48065 614 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 CAPRIN1Q14444 709 aaKnown RBP21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 GRAMD1BQ3KR37 738 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 GGTA1PQ4G0N0 100 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 RFTN2Q52LD8 501 aaPredicted RBP21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 LMNTD1Q8N9Z9 388 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 ICA1LQ8NDH6 482 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 OR4E2Q8NGC2 313 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 IL17FQ96PD4 163 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 CCDC3Q9BQI4 270 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 MUC13Q9H3R2 512 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 UCK1Q9HA47 277 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 UNC13CQ8NB66 2214 aa21.19■□□□□ 0.98
PTP4A3-204ENST00000521578 AQP12BA6NM10 295 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 DNAJA2O60884 412 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 ZXDCQ2QGD7 858 aaPredicted RBP21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 AQP12AQ8IXF9 295 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 FBXO15Q8NCQ5 510 aaPredicted RBP21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 ATL1Q8WXF7 558 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 SLCO4A1Q96BD0 722 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 PKP4Q99569 1192 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 TRIM15Q9C019 465 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 ICKQ9UPZ9 632 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 LILRA5A6NI73 299 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 B4GAT1O43505 415 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 TYRP1P17643 537 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 GPR3P46089 330 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 EEFSECP57772 596 aaKnown RBP21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 AMZ1Q400G9 498 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 NKAIN2Q5VXU1 208 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 SPRED1Q7Z699 444 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 OR9A1PQ8NGU1 263 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 HBEGFQ99075 208 aa21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 GMPR2Q9P2T1 348 aaKnown RBP21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 CNOT11Q9UKZ1 510 aaKnown RBP21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 ZNF490Q9ULM2 529 aaPredicted RBP21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 EIF3LQ9Y262 564 aaKnown RBP21.18■□□□□ 0.98
PTP4A3-204ENST00000521578 C15orf38-AP3S2A0A0A6YYH1 394 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 FFAR3O14843 346 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 GPR42O15529 346 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 UBXN7O94888 489 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 KRT6AP02538 564 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 KRT6BP04259 564 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 PNLIPP16233 465 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 CSRP1P21291 193 aaKnown RBP21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 KRT6CP48668 564 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 NR1D2Q14995 579 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 TIGD2Q4W5G0 525 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 LCN8Q6JVE9 175 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 ARPINQ7Z6K5 226 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 C2orf73Q8N5S3 287 aaPredicted RBP21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 CCDC138Q96M89 665 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 SRMSQ9H3Y6 488 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 YY1AP1Q9H869 796 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 ARMC1Q9NVT9 282 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 ACTR3BQ9P1U1 418 aa21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 POLR3HQ9Y535 204 aaPredicted RBP21.17■□□□□ 0.98
PTP4A3-204ENST00000521578 KCNE1BA0A087WTH5 132 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 IGHV1OR21-1A0A087WYE8 117 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 SPAARA0A1B0GVQ0 90 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 ATP6V1B2P21281 511 aa21.16■□□□□ 0.98
PTP4A3-204ENST00000521578 YBX1P67809 324 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms