RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 SCTRP47872 440 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 OLR1P78380 273 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 HERC3Q15034 1050 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 PDK4Q16654 411 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 FAM83EQ2M2I3 478 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 NADK2Q4G0N4 442 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 XKR6Q5GH73 641 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 TEX35Q5T0J7 233 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 VWA5B1Q5TIE3 1220 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 KIRREL2Q6UWL6 708 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 MYLK4Q86YV6 388 aaPredicted RBP13.43□□□□□ -0.26
VEGFA-221ENST00000520265 ZC3H7AQ8IWR0 971 aaKnown RBP13.43□□□□□ -0.26
VEGFA-221ENST00000520265 KRT78Q8N1N4 520 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 PEX11GQ96HA9 241 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 THOC3Q96J01 351 aaKnown RBP13.43□□□□□ -0.26
VEGFA-221ENST00000520265 SCYL1Q96KG9 808 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 PAFAH2Q99487 392 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 MESP1Q9BRJ9 268 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 TMEM79Q9BSE2 394 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 RHBGQ9H310 441 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 SLAMF7Q9NQ25 335 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 NUDT4Q9NZJ9 180 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 ZFP69BQ9UJL9 534 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 ANGPTL3Q9Y5C1 460 aa13.43□□□□□ -0.26
VEGFA-221ENST00000520265 SCN3AQ9NY46 2000 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 PCSK5Q92824 1860 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 A0A087WUV0 522 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-221ENST00000520265 EXOC1LA0A1B0GW35 172 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 SYCE1LA8MT33 242 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 H0YIG0 161 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 KLHL41O60662 606 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 KERAO60938 352 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 WISP3O95389 354 aaPredicted RBP13.42□□□□□ -0.26
VEGFA-221ENST00000520265 B3GALT4O96024 378 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 C2P06681 752 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 C8orf89P0DMQ9 161 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 C1GALT1C1LP0DN25 315 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 CASRP41180 1078 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 SLC6A12P48065 614 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 RAB8AP61006 207 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 SNRPNP63162 240 aaKnown RBP13.42□□□□□ -0.26
VEGFA-221ENST00000520265 DLG1Q12959 904 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 PWP1Q13610 501 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 MYBPC3Q14896 1274 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.42□□□□□ -0.263e-7■■■■■ 32.5
VEGFA-221ENST00000520265 GSPT2Q8IYD1 628 aaKnown RBP13.42□□□□□ -0.26
VEGFA-221ENST00000520265 OR11G2Q8NGC1 345 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 OR4K1Q8NGD4 311 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 OR51Q1Q8NH59 317 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 TM9SF4Q92544 642 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 FAR2Q96K12 515 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 CAPS2Q9BXY5 557 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 CPSF2Q9P2I0 782 aaKnown RBP13.42□□□□□ -0.26
VEGFA-221ENST00000520265 MED13Q9UHV7 2174 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 ZNF462Q96JM2 2506 aa13.42□□□□□ -0.26
VEGFA-221ENST00000520265 IGLV3-12A0A075B6K2 115 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 A0A0G2JN53 185 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 ANKDD1BA6NHY2 528 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 PSMD12O00232 456 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-221ENST00000520265 TAPBPO15533 448 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 BMP10O95393 424 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 ZIC2O95409 532 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-221ENST00000520265 HPP00738 406 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 PCNAP12004 261 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 ALOX12P18054 663 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 ECHS1P30084 290 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 AHRP35869 848 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 MLLT10P55197 1068 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 IRF8Q02556 426 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 HIST2H2ACQ16777 129 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-221ENST00000520265 ATG9BQ674R7 924 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 HIST2H2AA3Q6FI13 130 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 TMIGD1Q6UXZ0 262 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 ARHGEF39Q8N4T4 335 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 PDPRQ8NCN5 879 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 TRPV3Q8NET8 790 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 OR5T3Q8NGG3 340 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 NACC2Q96BF6 587 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 TM4SF19Q96DZ7 209 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 CNDP1Q96KN2 507 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 UBXN10Q96LJ8 280 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 ILKAPQ9H0C8 392 aaPredicted RBP13.41□□□□□ -0.26
VEGFA-221ENST00000520265 IGSF5Q9NSI5 407 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 OPTCQ9UBM4 332 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 PCDHGB7Q9Y5F8 929 aa13.41□□□□□ -0.26
VEGFA-221ENST00000520265 NUP210LQ5VU65 1888 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 TLN1Q9Y490 2541 aaKnown RBP13.4□□□□□ -0.26
VEGFA-221ENST00000520265 CEACAM4O75871 244 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 KRT38O76015 456 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 AGTR2P50052 363 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 SERPINB9P50453 376 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 STXBP1P61764 594 aaKnown RBP13.4□□□□□ -0.26
VEGFA-221ENST00000520265 CHIT1Q13231 466 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 PFKFB4Q16877 469 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 PAGE2BQ5JRK9 111 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 AGAP7PQ5VUJ5 663 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 SLCO4C1Q6ZQN7 724 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 LINC00696Q6ZRV3 163 aa13.4□□□□□ -0.26
VEGFA-221ENST00000520265 NDUFAF7Q7L592 441 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms