RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 MRFAP1Q9Y605 127 aa4.6□□□□□ -1.67
SDCBP-207ENST00000520168 IGLV3-16A0A075B6K0 115 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 UQCRHLA0A096LP55 91 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 C5orf60A6NFR6 353 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 LGALS16A8MUM7 142 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 TMCO5BA8MYB1 307 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 H7C1Q1 480 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 SYT5O00445 386 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 EPHB6O15197 1021 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 CDC40O60508 579 aaKnown RBP eCLIP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 SMPD2O60906 423 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 WDR1O75083 606 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 MPDZO75970 2070 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 SEC24DO94855 1032 aaPredicted RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 CRTAMO95727 393 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 FTLP02792 175 aaPredicted RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 FTH1P02794 183 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 CD48P09326 243 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 TCF4P15884 667 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ZFXP17010 805 aaPredicted RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 NAT1P18440 290 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 SONP18583 2426 aaKnown RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 CD9P21926 228 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 PAX7P23759 505 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 MCM3P25205 808 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ACRV1P26436 265 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ACADLP28330 430 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 PDHA2P29803 388 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 PEBP1P30086 187 aaKnown RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 PKLRP30613 574 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 TRPC1P48995 793 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ARSEP51690 589 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 DLX5P56178 289 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 GBE1Q04446 702 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ANK3Q12955 4377 aaKnown RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 MPP3Q13368 585 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 FASTKQ14296 549 aaKnown RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 KRT31Q15323 416 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 TAF1AQ15573 450 aaPredicted RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 SF1Q15637 639 aaKnown RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 FBXL19-AS1Q494R0 122 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 SYTL3Q4VX76 610 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 TEX44Q53QW1 395 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 DNAJC21Q5F1R6 531 aaKnown RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 E4F1Q66K89 784 aaPredicted RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ANKRD34AQ69YU3 496 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 HMBOX1Q6NT76 420 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 RGS9BPQ6ZS82 235 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ARHGEF18Q6ZSZ5 1173 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 BEND4Q6ZU67 534 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 RNF44Q7L0R7 432 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 BZW1Q7L1Q6 419 aaKnown RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 APTXQ7Z2E3 356 aaKnown RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 KIF18BQ86Y91 864 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 CRLF3Q8IUI8 442 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 TMTC1Q8IUR5 882 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 CCDC71Q8IV32 467 aaPredicted RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 IQCF2Q8IXL9 164 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 C17orf53Q8N3J3 647 aaPredicted RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 OR2L8Q8NGY9 312 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 GIMAP7Q8NHV1 300 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 MCOLN3Q8TDD5 553 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 CABS1Q96KC9 395 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 TEKT5Q96M29 485 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 VAT1Q99536 393 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ZFYVE21Q9BQ24 234 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 MESP1Q9BRJ9 268 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 TTYH2Q9BSA4 534 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 SYT11Q9BT88 431 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 MENTQ9BUN1 341 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 YIPF2Q9BWQ6 316 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 FSD1LQ9BXM9 530 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 HES7Q9BYE0 225 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 PIF1Q9H611 641 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 PLEKHF2Q9H8W4 249 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 GLOD4Q9HC38 313 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ZNF69Q9UC07 566 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 VTI1BQ9UEU0 232 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ZC3H7BQ9UGR2 993 aaKnown RBP4.59□□□□□ -1.67
SDCBP-207ENST00000520168 TRPS1Q9UHF7 1281 aa4.59□□□□□ -1.67
SDCBP-207ENST00000520168 ARID1AO14497 2285 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 A0A0G2JNJ9 132 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 A0A1W2PRQ8 180 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 TUBAL3A6NHL2 446 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 HSPB2A8KAH6 182 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ACOT7O00154 380 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 MYO1FO00160 1098 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 FCHO1O14526 889 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 DVL2O14641 736 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 HS6ST1O60243 411 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 PKMP14618 531 aaKnown RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 GABRA1P14867 456 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 TACR1P25103 407 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 UQCRC1P31930 480 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 TRHRP34981 398 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-207ENST00000520168 AVPR1BP47901 424 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 KLK7P49862 253 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ASCL1P50553 236 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 WNT3AP56704 352 aa4.58□□□□□ -1.68
SDCBP-207ENST00000520168 ETF1P62495 437 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms