RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 TFGQ92734 400 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PSKH2Q96QS6 385 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR51B5Q9H339 312 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 ELL3Q9HB65 397 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 TMEM27Q9HBJ8 222 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 MOV10Q9HCE1 1003 aaKnown RBP10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PRDM8Q9NQV8 689 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 TMLHEQ9NVH6 421 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 TAC3Q9UHF0 121 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PCTPQ9UKL6 214 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 CDH7Q9ULB5 785 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 B3GNT3Q9Y2A9 372 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 TMEM98Q9Y2Y6 226 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 RWDD3Q9Y3V2 267 aa10.5□□□□□ -0.73
PCDHGA1-202ENST00000517417 PTPRZ1P23471 2315 aaPredicted RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 IQCMA0A1B0GVH7 501 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 C2orf78A6NCI8 922 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 LEFTY2O00292 366 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 PGRMC2O15173 223 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 PSMA1P25786 263 aaKnown RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 OLR1P78380 273 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 RHAGQ02094 409 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 MVKQ03426 396 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 SLC13A2Q13183 592 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 TEAD4Q15561 434 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 TAB1Q15750 504 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF404Q494X3 552 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 KIAA0319Q5VV43 1072 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 PLEKHG7Q6ZR37 379 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 USP43Q70EL4 1123 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 PXYLP1Q8TE99 480 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 HMGB4Q8WW32 186 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 FUBP1Q96AE4 644 aaKnown RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZBED6CLQ96FA7 236 aaPredicted RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 FCRL4Q96PJ5 515 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 MARCH7Q9H992 704 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 PCDHGB3Q9Y5G1 929 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 MCIDASD6RGH6 385 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 GNB5O14775 395 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 MITFO75030 526 aaPredicted RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 ERN1O75460 977 aaKnown RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 AP2A2O94973 939 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 CPN2P22792 545 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 TCEA1P23193 301 aaKnown RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 AFF1P51825 1210 aaKnown RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 AP1S2P56377 157 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZFP69Q49AA0 526 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 TPRG1LQ5T0D9 272 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 TBPL2Q6SJ96 375 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZZZ3Q8IYH5 903 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 UMODL1-AS1Q8N2C9 162 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 CHDHQ8NE62 594 aaPredicted RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 IPCEF1Q8WWN9 437 aaPredicted RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 COL21A1Q96P44 957 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 GAL3ST4Q96RP7 486 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZSCAN5AQ9BUG6 496 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 ITPAQ9BY32 194 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 PAK1IP1Q9NWT1 392 aaPredicted RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 SLCO3A1Q9UIG8 710 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 IKZF2Q9UKS7 526 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 KCNK6Q9Y257 313 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 DOCK5Q9H7D0 1870 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 K7ERQ8 282 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 CLDN4O14493 209 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 PDPK1O15530 556 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 PLOD3O60568 738 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 RPLP0P05388 317 aaKnown RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 GSTT2P0CG29 244 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 GSTT2BP0CG30 244 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 AZGP1P25311 298 aaKnown RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 THOC7Q6I9Y2 204 aaKnown RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 AGTRAPQ6RW13 159 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 POF1BQ8WVV4 589 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 C1orf74Q96LT6 269 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 EFCAB11Q9BUY7 163 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 EHD1Q9H4M9 534 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 MRPS30Q9NP92 439 aaKnown RBP10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZDHHC4Q9NPG8 344 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 TVP23BQ9NYZ1 205 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 PEX16Q9Y5Y5 336 aa10.49□□□□□ -0.73
PCDHGA1-202ENST00000517417 KIAA1217Q5T5P2 1943 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 DNAJA1P31689 397 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 CLK3P49761 638 aaKnown RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 TARDBPQ13148 414 aaKnown RBP eCLIP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 DPY19L1Q2PZI1 675 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ALKAL1Q6UXT8 129 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 DPY19L3Q6ZPD9 716 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 TMEM151AQ8N4L1 468 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 KRTCAP2Q8N6L1 136 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF433Q8N7K0 673 aaPredicted RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 PMEPA1Q969W9 287 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 SIPA1Q96FS4 1042 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 KCNS3Q9BQ31 491 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 TRIM39Q9HCM9 518 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 ITM2CQ9NQX7 267 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 NLE1Q9NVX2 485 aaPredicted RBP10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 FZD4Q9ULV1 537 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 EVPLQ92817 2033 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 UPK3BL1B0FP48 263 aa10.48□□□□□ -0.73
PCDHGA1-202ENST00000517417 UPK3BL2E5RIL1 263 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms