RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CTNNA1P35221 906 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PTPN7P35236 360 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 MSX2P35548 267 aaPredicted RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 HSD17B3P37058 310 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ADCY8P40145 1251 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 CETN2P41208 172 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 GNPDA1P46926 289 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RENBPP51606 427 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 CDH6P55285 790 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RWDD2BP57060 319 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 TPI1P60174 286 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ELF3P78545 371 aaPredicted RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 IL10RBQ08334 325 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RIPK1Q13546 671 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 TFDP2Q14188 446 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PAFAH1B3Q15102 231 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 SNCBQ16143 134 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PPP2R5EQ16537 467 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 CDO1Q16878 200 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ALFQ53S48 1182 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ODF2Q5BJF6 829 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 CMPK2Q5EBM0 449 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF789Q5FWF6 425 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 FAM72AQ5TYM5 149 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 SLC9A4Q6AI14 798 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RAET1GQ6H3X3 334 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 FAM72DQ6L9T8 149 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RWDD4Q6NW29 188 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 C8orf74Q6P047 294 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 MRPL14Q6P1L8 145 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 UNC5DQ6UXZ4 953 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 MICALCLQ6ZW33 695 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 SPATC1Q76KD6 591 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PHLDB2Q86SQ0 1253 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 DAAM2Q86T65 1068 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 TAX1BP1Q86VP1 789 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 FAM72BQ86X60 149 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RAVER1Q8IY67 606 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 KATNAL2Q8IYT4 538 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 BBS5Q8N3I7 341 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 TEX26Q8N6G2 289 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PCDH20Q8N6Y1 951 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 CCDC185Q8N715 623 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 UBL4BQ8N7F7 174 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF441Q8N8Z8 693 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 LRRC57Q8N9N7 239 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 EIF1ADQ8N9N8 165 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 TMEM178AQ8NBL3 297 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PLA2G15Q8NCC3 412 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 MDS2Q8NDY4 140 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 TRIM58Q8NG06 486 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 OR11G2Q8NGC1 345 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 EXD1Q8NHP7 514 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 CCT6BQ92526 530 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RAPGEF5Q92565 580 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 P3H4Q92791 437 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ARHGEF2Q92974 986 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 LRRC58Q96CX6 371 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ZDHHC12Q96GR4 267 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RBM41Q96IZ5 413 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 MS4A14Q96JA4 679 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF641Q96N77 438 aaPredicted RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF570Q96NI8 536 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 WFIKKN1Q96NZ8 548 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF317Q96PQ6 595 aaPredicted RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 CSPG4P5Q96PW8 444 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RNF157Q96PX1 679 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PSKH2Q96QS6 385 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 TUBGCP5Q96RT8 1024 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PEBP4Q96S96 227 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 VAT1Q99536 393 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 FERMT1Q9BQL6 677 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PLCD4Q9BRC7 762 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 SNRNP25Q9BV90 132 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RBM24Q9BX46 236 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 MAK16Q9BXY0 300 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PACSIN1Q9BY11 444 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 FRMD8P1Q9BZ68 369 aaPredicted RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 FAM129AQ9BZQ8 928 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 KLC2Q9H0B6 622 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 MUC3BQ9H195 1237 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 DHX35Q9H5Z1 703 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF160Q9HCG1 818 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PCDH18Q9HCL0 1135 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RYDENQ9NUL5 291 aaKnown RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 GALNT8Q9NY28 637 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 COX16Q9P0S2 106 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 MDFICQ9P1T7 246 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF629Q9UEG4 869 aaPredicted RBP2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PCSK1NQ9UHG2 260 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 VPS28Q9UK41 221 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 RNF112Q9ULX5 631 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 NFU1Q9UMS0 254 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 SLC12A4Q9UP95 1085 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 C15orf41Q9Y2V0 281 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 PCDHA3Q9Y5H8 950 aa2.93□□□□□ -1.94
SCARNA13-201ENST00000516672 A0A0D9SEW6 157 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 CFAP69A5D8W1 941 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 A6NHS1 94 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 C16orf96A6NNT2 1141 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms