RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 GABRA4P48169 554 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 PDX1P52945 283 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 ARFIP1P53367 373 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 ARSFP54793 590 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 VSX2P58304 361 aaPredicted RBP6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 SKP1P63208 163 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 OCRLQ01968 901 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 GUCY1A3Q02108 690 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 CYP4F3Q08477 520 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 TUBB3Q13509 450 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 CUL3Q13618 768 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 KCNAB1Q14722 419 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 TMEM35AQ53FP2 167 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 SH2D4BQ5SQS7 431 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 DCAF12Q5T6F0 453 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 NIPAL1Q6NVV3 410 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 CEACAM20Q6UY09 585 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 RNF165Q6ZSG1 346 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 TRIM46Q7Z4K8 759 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 PPP1R3BQ86XI6 285 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 PLD3Q8IV08 490 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 WDR75Q8IWA0 830 aaKnown RBP6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 CSNK1A1LQ8N752 337 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 ZNF781Q8N8C0 355 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 ANKRD53Q8N9V6 530 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 TTC29Q8NA56 475 aaPredicted RBP6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 ZNF740Q8NDX6 193 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 HUS1BQ8NHY5 278 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 WDR20Q8TBZ3 569 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 PIWIL2Q8TC59 973 aaKnown RBP6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 NT5CQ8TCD5 201 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 CREB3L4Q8TEY5 395 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 ZNF473Q8WTR7 871 aaKnown RBP6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 USP7Q93009 1102 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 MTFMTQ96DP5 389 aaKnown RBP6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 METTL2AQ96IZ6 378 aaKnown RBP6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 TEFMQ96QE5 360 aaKnown RBP6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 TAAR9Q96RI9 348 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 SORT1Q99523 831 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 NDC1Q9BTX1 674 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 SHCBP1LQ9BZQ2 653 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 SLC7A5P2Q9GIP4 190 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 SPNS1Q9H2V7 528 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 ZNF395Q9H8N7 513 aaPredicted RBP6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 BRF2Q9HAW0 419 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 OCIAD1Q9NX40 245 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 SIDT1Q9NXL6 827 aaKnown RBP6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 SLC39A1Q9NY26 324 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 ZNF225Q9UK10 706 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 CDC14AQ9UNH5 594 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 LHX6Q9UPM6 363 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 TIMM22Q9Y584 194 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 PCDHGA8Q9Y5G5 932 aa6.75□□□□□ -1.33
SCARNA6-201ENST00000515982 ITPR1Q14643 2758 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 A0A088AWK7 358 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 LOC105369274A0A096LPK9 316 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 LOC102723532A0A0G2JNH3 316 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 A0A1B0GTL3 188 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 FITM1A5D6W6 292 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 LRIT2A6NDA9 550 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 TRPC5OSA6NMA1 111 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 TAF4O00268 1085 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 POLR3GO15318 223 aaPredicted RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 HDAC3O15379 428 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 NDUFS4O43181 175 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 VPS4BO75351 444 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 ZIC2O95409 532 aaPredicted RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 TGDSO95455 350 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 TGFB1P01137 390 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 PDYNP01213 254 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 PIM1P11309 404 aaPredicted RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 ZNF10P21506 573 aaPredicted RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 RBMS1P29558 406 aaKnown RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 NEK2P51955 445 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 RPS13P62277 151 aaKnown RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 CYP4F2P78329 520 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 CSTF3Q12996 717 aaKnown RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 DDX39BQ13838 428 aaKnown RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 FAM53BQ14153 422 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 GPR19Q15760 415 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 IMPG1Q17R60 797 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 MUM1Q2TAK8 710 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 PRTGQ2VWP7 1150 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 UGT3A2Q3SY77 523 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.74□□□□□ -1.334e-14■■■■□ 20.2
SCARNA6-201ENST00000515982 SGO1Q5FBB7 561 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 DEPDC1Q5TB30 811 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 CES4AQ5XG92 561 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 KANK2Q63ZY3 851 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 FRMPD2BQ6IN97 320 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 ABHD13Q7L211 337 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 VN1R4Q7Z5H5 301 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 OR4N4Q8N0Y3 316 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 BMPERQ8N8U9 685 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 OR1L3Q8NH93 324 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 RGMAQ96B86 450 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 ZNF501Q96CX3 271 aaPredicted RBP6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 MVB12AQ96EY5 273 aa6.74□□□□□ -1.33
SCARNA6-201ENST00000515982 QRFPRQ96P65 431 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms