RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 RPA4Q13156 261 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 CDK10Q15131 360 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 ANKRD49Q8WVL7 239 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 INTS7Q9NVH2 962 aaKnown RBP12.73□□□□□ -0.37
TCOF1-213ENST00000514442 GLI3P10071 1580 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 ZNF840PA6NDX5 716 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 HIST1H2ABP04908 130 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 RHOP08100 348 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 ZNF8P17098 575 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-213ENST00000514442 PTPN5P54829 565 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 SMIM11AP58511 58 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 DCDC1P59894 354 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 PPP2R2BQ00005 443 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 HKDC1Q2TB90 917 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 CCDC58Q4VC31 144 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 HIST3H2AQ7L7L0 130 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 GPR65Q8IYL9 337 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 PM20D2Q8IYS1 436 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 TSPEARQ8WU66 669 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 DNAJA4Q8WW22 397 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-213ENST00000514442 HIST1H2ACQ93077 130 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 PDCD10Q9BUL8 212 aa12.73□□□□□ -0.37
TCOF1-213ENST00000514442 GOLGA4Q13439 2230 aaKnown RBP12.72□□□□□ -0.37
TCOF1-213ENST00000514442 TJP1Q07157 1748 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 A0A0G2JPF8 293 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 MAGEB17A8MXT2 336 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 HNRNPCL3B7ZW38 293 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 ACOT8O14734 319 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 SLC30A4O14863 429 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 UGT2B17O75795 530 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 APOL3O95236 402 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 TGFB1P01137 390 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 HNRNPCL4P0DMR1 293 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 PRPS2P11908 318 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 CRHBPP24387 322 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 SLBPQ14493 270 aaKnown RBP eCLIP12.72□□□□□ -0.37
TCOF1-213ENST00000514442 HSD17B12Q53GQ0 312 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 SLC39A5Q6ZMH5 540 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 MAVSQ7Z434 540 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 TXNDC5Q8NBS9 432 aaKnown RBP12.72□□□□□ -0.37
TCOF1-213ENST00000514442 C2CD4AQ8NCU7 369 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-213ENST00000514442 MUL1Q969V5 352 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 MALT1Q9UDY8 824 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 NUP50Q9UKX7 468 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 MRPS7Q9Y2R9 242 aaKnown RBP12.72□□□□□ -0.37
TCOF1-213ENST00000514442 CACNA1SQ13698 1873 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 MAFKO60675 156 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 SNRPD2P62316 118 aaKnown RBP12.72□□□□□ -0.37
TCOF1-213ENST00000514442 ZNF33AQ06730 810 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 LMAN2Q12907 356 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 POMZP3Q6PJE2 187 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 COMMD7Q86VX2 200 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 ABCG4Q9H172 646 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 PTGFRNQ9P2B2 879 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 MAB21L2Q9Y586 359 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 ZNF487B1APH4 448 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 PKLRP30613 574 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 CD47Q08722 323 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 KIAA1614Q5VZ46 1190 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 ZNF778Q96MU6 729 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 SLC38A2Q96QD8 506 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 STC2O76061 302 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 SLC35G6P0C7Q6 338 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 JUNBP17275 347 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-213ENST00000514442 BMP7P18075 431 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 OR2T5Q6IEZ7 315 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 PRSS58Q8IYP2 241 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 C3orf58Q8NDZ4 430 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 OR2T29Q8NH02 315 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 TEX47Q8TBZ9 253 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 ZNF675Q8TD23 568 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 ELAC1Q9H777 363 aaKnown RBP12.72□□□□□ -0.37
TCOF1-213ENST00000514442 POLMQ9NP87 494 aaPredicted RBP12.72□□□□□ -0.37
TCOF1-213ENST00000514442 INTS6Q9UL03 887 aaKnown RBP12.72□□□□□ -0.37
TCOF1-213ENST00000514442 PCDHGB5Q9Y5G0 923 aa12.72□□□□□ -0.37
TCOF1-213ENST00000514442 SCN2BO60939 215 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 STX11O75558 287 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 CLCNKAP51800 687 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 ZNF155Q12901 538 aaPredicted RBP12.71□□□□□ -0.37
TCOF1-213ENST00000514442 MINDY4Q4G0A6 757 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 ATP13A5Q4VNC0 1218 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 Q6ZVL8 140 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 RFPL4BQ6ZWI9 263 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 PLCZ1Q86YW0 608 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 ADGRG5Q8IZF4 528 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 ADGRG2Q8IZP9 1017 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 ASB12Q8WXK4 309 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 GTF2H4Q92759 462 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 IRF7Q92985 503 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 TSGA13Q96PP4 275 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 RAD9AQ99638 391 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 CCM2Q9BSQ5 444 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 NSUN3Q9H649 340 aaKnown RBP12.71□□□□□ -0.37
TCOF1-213ENST00000514442 COMMD3Q9UBI1 195 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 EDDM13A0A1B0GTR0 161 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 ZBTB42B2RXF5 422 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 PI15O43692 258 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 PFKMP08237 780 aa12.71□□□□□ -0.37
TCOF1-213ENST00000514442 STOMP27105 288 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms