RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 LRRK1Q38SD2 2015 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 A8MU76 341 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 G3V3Q6 166 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 H7C0S8 307 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 LZTS3O60299 673 aaPredicted RBP7.15□□□□□ -1.27
CLIP1-205ENST00000514271 PCDHGA12O60330 932 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 STAMBPO95630 424 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 TBX18O95935 607 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 PKLRP30613 574 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 CHRNA4P43681 627 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 PTPN5P54829 565 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 TPD52P55327 224 aaPredicted RBP7.15□□□□□ -1.27
CLIP1-205ENST00000514271 PLIN5Q00G26 463 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 FZD5Q13467 585 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 PLCL1Q15111 1095 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 CDO1Q16878 200 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.15□□□□□ -1.273e-6■■■■■ 26.9
CLIP1-205ENST00000514271 RNF219Q5W0B1 726 aaPredicted RBP7.15□□□□□ -1.27
CLIP1-205ENST00000514271 NADSYN1Q6IA69 706 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 NAPEPLDQ6IQ20 393 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 RABEPKQ7Z6M1 372 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 TSPYL5Q86VY4 417 aaPredicted RBP7.15□□□□□ -1.27
CLIP1-205ENST00000514271 WDR5BQ86VZ2 330 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 HS3ST5Q8IZT8 346 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 NETO2Q8NC67 525 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 ASB15Q8WXK1 588 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 HPS1Q92902 700 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 LRRC3BQ96PB8 259 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 LATS2Q9NRM7 1088 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 IL20Q9NYY1 176 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 GRIP1Q9Y3R0 1128 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 DGKBQ9Y6T7 804 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 MYO9BQ13459 2157 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 DOCK6Q96HP0 2047 aa7.15□□□□□ -1.27
CLIP1-205ENST00000514271 EDDM13A0A1B0GTR0 161 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 H0YC42 278 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NCK1P16333 377 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NR4A2P43354 598 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 PIGFQ07326 219 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 TRAF3Q13114 568 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 C6orf136Q5SQH8 315 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 TTC23Q5W5X9 447 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 ATG9BQ674R7 924 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 FBXL22Q6P050 247 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 LAS2Q8IYD9 372 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 DTWD2Q8NBA8 298 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 LGALS12Q96DT0 336 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NODALQ96S42 347 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 DHRS9Q9BPW9 319 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NEK6Q9HC98 313 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 ABCB8Q9NUT2 735 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 EGFL7Q9UHF1 273 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 EIF2B4Q9UI10 523 aaKnown RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 DAPK2Q9UIK4 370 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 ARRDC5A6NEK1 342 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NEDD8-MDP1E9PL57 170 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 GAPDHSO14556 408 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 AZIN1O14977 448 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NDUFB5O43674 189 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF217O75362 1048 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 LRIG2O94898 1065 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 LDLRP01130 860 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NTSR1P30989 418 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 AP2S1P53680 142 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NCS1P62166 190 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 LRRC74AQ0VAA2 488 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 LCP2Q13094 533 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 ASAH1Q13510 395 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NEDD8Q15843 81 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 SSX1Q16384 188 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 TMEM201Q5SNT2 666 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 TMEM236Q5W0B7 351 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 SLC36A4Q6YBV0 504 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 SLCO6A1Q86UG4 719 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 CCDC103Q8IW40 242 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 LRRC56Q8IYG6 542 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 C8orf59Q8N0T1 100 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 SPATA6LQ8N4H0 392 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 SPATA22Q8NHS9 363 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 AARSD1Q9BTE6 412 aaKnown RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 BDH2Q9BUT1 245 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 SMURF2Q9HAU4 748 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 ZDHHC4Q9NPG8 344 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 ELOVL2Q9NXB9 296 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 BFARQ9NZS9 450 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 HS3ST2Q9Y278 367 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 LINC00862A6NCI5 91 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 KCNK1O00180 336 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NARSO43776 548 aaKnown RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 RAMP2O60895 175 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 TP53P04637 393 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 HMBSP08397 361 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 PIPP12273 146 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 HLA-DMAP28067 261 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 PGFP49763 221 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 MVDP53602 400 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 TPTEP56180 551 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 ZXDBP98169 803 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 EEF1A2Q05639 463 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms