RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 NUP210LQ5VU65 1888 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 A0A0A6YYC8 382 aaPredicted RBP10.78□□□□□ -0.68
HTT-213ENST00000513806 ANKDD1BA6NHY2 528 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 MAGEB17A8MXT2 336 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 I3L1I5 382 aaPredicted RBP10.78□□□□□ -0.68
HTT-213ENST00000513806 SGK494L7N484 410 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 RTCAO00442 366 aaKnown RBP10.78□□□□□ -0.68
HTT-213ENST00000513806 MANBAO00462 879 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 BIRC5O15392 142 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 ATP8B1O43520 1251 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 NPHS1O60500 1241 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 SRPX2O60687 465 aaPredicted RBP10.78□□□□□ -0.68
HTT-213ENST00000513806 DLGAP3O95886 979 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 PDYNP01213 254 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 MSL3P1P0C860 447 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 IL1RNP18510 177 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 CXCR2P25025 360 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 HMOX2P30519 316 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 GCGRP47871 477 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 RAB15P59190 212 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 OLR1P78380 273 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 MAT1AQ00266 395 aaKnown RBP10.78□□□□□ -0.68
HTT-213ENST00000513806 PCDH1Q08174 1060 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 LAPTM5Q13571 262 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 HIST2H2ACQ16777 129 aaPredicted RBP10.78□□□□□ -0.68
HTT-213ENST00000513806 SYT16Q17RD7 645 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.78□□□□□ -0.68
HTT-213ENST00000513806 PAGE2BQ5JRK9 111 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 HIST2H2AA3Q6FI13 130 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 METTL2BQ6P1Q9 378 aaKnown RBP10.78□□□□□ -0.68
HTT-213ENST00000513806 LAS2Q8IYD9 372 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 AMER3Q8N944 861 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 TTC29Q8NA56 475 aaPredicted RBP10.78□□□□□ -0.68
HTT-213ENST00000513806 OR9A4Q8NGU2 314 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 WDR20Q8TBZ3 569 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 METTL6Q8TCB7 284 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 NT5CQ8TCD5 201 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 CNDP1Q96KN2 507 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 SARGQ9BW04 601 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 DRC3Q9H069 523 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 DMRT3Q9NQL9 472 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 TRPS1Q9UHF7 1281 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 ZDHHC2Q9UIJ5 367 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 PCDHGA3Q9Y5H0 932 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 CROCCQ5TZA2 2017 aa10.78□□□□□ -0.68
HTT-213ENST00000513806 IGF2RP11717 2491 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 APC2O95996 2303 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 FITM1A5D6W6 292 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 H0YIV9 168 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 NVLO15381 856 aaKnown RBP10.77□□□□□ -0.69
HTT-213ENST00000513806 FOXS1O43638 330 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 RAD1O60671 282 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 UGDHO60701 494 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 CRCPO75575 148 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 ESRRBO95718 433 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 HSPA4LO95757 839 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 MLYCDO95822 493 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 SERPINE1P05121 402 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 AHRP35869 848 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 SLC1A6P48664 564 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 SLC18A1P54219 525 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 PKNOX1P55347 436 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 ABCE1P61221 599 aaKnown RBP10.77□□□□□ -0.69
HTT-213ENST00000513806 SHC2P98077 582 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 RELAQ04206 551 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 ASPHQ12797 758 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 STX3Q13277 289 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 GRM7Q14831 915 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 ABRAXAS2Q15018 415 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 TBC1D25Q3MII6 688 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 GGTA1PQ4G0N0 100 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 HSP90B2PQ58FF3 399 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 TCTE1Q5JU00 501 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 SH2D4BQ5SQS7 431 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 TMEM164Q5U3C3 297 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 TMEM214Q6NUQ4 689 aaKnown RBP10.77□□□□□ -0.69
HTT-213ENST00000513806 TLDC1Q6P9B6 456 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 RIPOR1Q6ZS17 1223 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 UBE3DQ7Z6J8 389 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 VASH2Q86V25 355 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 PDSS2Q86YH6 399 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 TBC1D19Q8N5T2 526 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 ZNF781Q8N8C0 355 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 CAMKVQ8NCB2 501 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 OR5T3Q8NGG3 340 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 UTP15Q8TED0 518 aaKnown RBP10.77□□□□□ -0.69
HTT-213ENST00000513806 SELENOMQ8WWX9 145 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 MR1Q95460 341 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 THAP11Q96EK4 314 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 PPP1R36Q96LQ0 422 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 SORT1Q99523 831 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 NDC1Q9BTX1 674 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 MS4A8Q9BY19 250 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 ASPSCR1Q9BZE9 553 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 SPRY4Q9C004 299 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 SLC6A16Q9GZN6 736 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 RHBGQ9H310 441 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 NT5DC2Q9H857 520 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 PNPOQ9NVS9 261 aa10.77□□□□□ -0.69
HTT-213ENST00000513806 LOC101059948A0A1B0GTJ6 334 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms