RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 TMEM44Q2T9K0 475 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 RAB6CQ53S08 254 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 TPGS2Q68CL5 300 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 C17orf99Q6UX52 265 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF730Q6ZMV8 503 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 DTWD1Q8N5C7 304 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 PARP16Q8N5Y8 322 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 BEND7Q8N7W2 519 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-211ENST00000513346 SHKBP1Q8TBC3 707 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 GEMIN6Q8WXD5 167 aaKnown RBP10.9□□□□□ -0.66
TCOF1-211ENST00000513346 VMP1Q96GC9 406 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 SUSD3Q96L08 255 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 SAMD11Q96NU1 681 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 RAB6CQ9H0N0 254 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 OSBPL2Q9H1P3 480 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 NMUR1Q9HB89 426 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 ENAMQ9NRM1 1142 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 PCDHGB5Q9Y5G0 923 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 A0A1B0GTW7 788 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 IRAK2O43187 625 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 CD1DP15813 335 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 NFKB2Q00653 900 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 GPM6BQ13491 265 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 TUBB3Q13509 450 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 TAF1AQ15573 450 aaPredicted RBP10.9□□□□□ -0.66
TCOF1-211ENST00000513346 SHQ1Q6PI26 577 aaKnown RBP10.9□□□□□ -0.66
TCOF1-211ENST00000513346 HFE2Q6ZVN8 426 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 TAF8Q7Z7C8 310 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 COMMD7Q86VX2 200 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 LACC1Q8IV20 430 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF382Q96SR6 550 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 IMP3Q9NV31 184 aaKnown RBP10.9□□□□□ -0.66
TCOF1-211ENST00000513346 NPAP1Q9NZP6 1156 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 HCN4Q9Y3Q4 1203 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 UGT2A1Q9Y4X1 527 aa10.9□□□□□ -0.66
TCOF1-211ENST00000513346 TRAV6A0A075B6T7 132 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 A0A1W2PQ45 241 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-211ENST00000513346 A0A1W2PQY0 241 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 SMIM30A4D0T7 59 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 INSIG1O15503 277 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 ENTPD6O75354 484 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 POP4O95707 220 aaKnown RBP10.89□□□□□ -0.67
TCOF1-211ENST00000513346 NUDT14O95848 222 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 OPN1SWP03999 348 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 CD247P20963 164 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 SPAM1P38567 509 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 CXCR4P61073 352 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 AP1S1P61966 158 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 BCL7AQ4VC05 210 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 DNAJB7Q7Z6W7 309 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-211ENST00000513346 L3HYPDHQ96EM0 354 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 RPL10LQ96L21 214 aaKnown RBP10.89□□□□□ -0.67
TCOF1-211ENST00000513346 FERD3LQ96RJ6 166 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 MMP28Q9H239 520 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 KCNH6Q9H252 994 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 FAM86C2PA6NEL3 165 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 EDIL3O43854 480 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 ALX3O95076 343 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 TBX18O95935 607 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 SCARB2Q14108 478 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 PAGE3Q5JUK9 113 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 SIRPB2Q5JXA9 342 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 ANKRD54Q6NXT1 300 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 GOLGA7Q7Z5G4 137 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 FAM20CQ8IXL6 584 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 ANKRD49Q8WVL7 239 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 AP2M1Q96CW1 435 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 HCN3Q9P1Z3 774 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 NLKQ9UBE8 527 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 PPIEQ9UNP9 301 aaKnown RBP10.89□□□□□ -0.67
TCOF1-211ENST00000513346 FCF1Q9Y324 198 aaKnown RBP10.89□□□□□ -0.67
TCOF1-211ENST00000513346 ZNF879B4DU55 563 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 EDNRBP24530 442 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 PRKCDQ05655 676 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 KEAP1Q14145 624 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 CST9Q5W186 159 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 STEAP3Q658P3 488 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 LARP4Q71RC2 724 aaKnown RBP eCLIP10.89□□□□□ -0.67
TCOF1-211ENST00000513346 OSTM1Q86WC4 334 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 KLHL36Q8N4N3 616 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 AQP11Q8NBQ7 271 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 PIGKQ92643 395 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 SCRN2Q96FV2 425 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 QPCTLQ9NXS2 382 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 TBC1D24Q9ULP9 559 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 ANKRD12Q6UB98 2062 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 CLDN24A6NM45 220 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 CLCA1A8K7I4 914 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 WNT9AO14904 365 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 PSMD8P48556 350 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 CAP1Q01518 475 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 OLFML2AQ68BL7 652 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 ZNF433Q8N7K0 673 aaPredicted RBP10.89□□□□□ -0.67
TCOF1-211ENST00000513346 ZC3H10Q96K80 434 aaKnown RBP10.89□□□□□ -0.67
TCOF1-211ENST00000513346 TTLL2Q9BWV7 592 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 ATG10Q9H0Y0 220 aa10.89□□□□□ -0.67
TCOF1-211ENST00000513346 RP1L1Q8IWN7 2480 aaPredicted RBP10.88□□□□□ -0.67
TCOF1-211ENST00000513346 URADA6NGE7 173 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 FAM25EA8MYX2 175 aa10.88□□□□□ -0.67
TCOF1-211ENST00000513346 H3BM21 787 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms