RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CACNG4Q9UBN1 327 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 GINS2Q9Y248 185 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 RPS6KL1Q9Y6S9 549 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 FOCADQ5VW36 1801 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 MGAMO43451 1857 aa3.92□□□□□ -1.78
HTT-210ENST00000512909 DUXAA6NLW8 204 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 HEPACAM2A8MVW5 462 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 M0QZ92 97 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 CHMP2AO43633 222 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 PRKRAO75569 313 aaKnown RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 RPS6KA5O75582 802 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 RECQL5O94762 991 aaPredicted RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 SLCO2B1O94956 709 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 LUC7L3O95232 432 aaKnown RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 GCNT3O95395 438 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 MOCS3O95396 460 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 LGALS2P05162 132 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 IQCF3P0C7M6 154 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 SMIM10L2AP0DMW4 78 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 SMIM10L2BP0DMW5 78 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 SAGP10523 405 aaPredicted RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 FGF5P12034 268 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 MYOGP15173 224 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 FOSL2P15408 326 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 HOXB6P17509 224 aaKnown RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 MSH3P20585 1137 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 PTAFRP25105 342 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 HSD17B3P37058 310 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 BMXP51813 675 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 BRWD1-AS2P59051 145 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 SCN1BQ07699 218 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 ACSM1Q08AH1 577 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 DMPKQ09013 629 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 CUL3Q13618 768 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 TRIM29Q14134 588 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 ODF4Q2M2E3 257 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 RAB6CQ53S08 254 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 STPG1Q5TH74 334 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 RUSC1-AS1Q66K80 236 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 MOXD1Q6UVY6 613 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 ENPP7Q6UWV6 458 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 RBPMS2Q6ZRY4 209 aaKnown RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 FAM47EQ6ZV65 393 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 ARHGAP22Q7Z5H3 698 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 TMCO2Q7Z6W1 182 aaPredicted RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 ARHGAP24Q8N264 748 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 METTL13Q8N6R0 699 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 NECAB1Q8N987 351 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 CCDC148Q8NFR7 591 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 OR2T12Q8NG77 320 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 PPTC7Q8NI37 304 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 SPSB1Q96BD6 273 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 ZNF274Q96GC6 653 aaPredicted RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 CDHR1Q96JP9 859 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 CDX2Q99626 313 aaPredicted RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 ZNF577Q9BSK1 485 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 EDEM3Q9BZQ6 932 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 GPR88Q9GZN0 384 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 RAB6CQ9H0N0 254 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 ZNF334Q9HCZ1 680 aaPredicted RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 PPANQ9NQ55 473 aaKnown RBP3.91□□□□□ -1.78
HTT-210ENST00000512909 NRBP2Q9NSY0 501 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 BARHL2Q9NY43 387 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 TXNDC16Q9P2K2 825 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 RASAL2Q9UJF2 1139 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 TBX21Q9UL17 535 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 MTUS1Q9ULD2 1270 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 KCNJ14Q9UNX9 436 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 UBIAD1Q9Y5Z9 338 aa3.91□□□□□ -1.78
HTT-210ENST00000512909 PTPRFP10586 1907 aa3.9□□□□□ -1.78
HTT-210ENST00000512909 GSTTP1A0A1W2PQM5 241 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 A0A1W2PRQ8 180 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 FAM170AA1A519 330 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 NEMP2A6NFY4 417 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 PRSS44E7EML9 344 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 E9PI62 339 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 PLOD2O00469 737 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 KCNAB3O43448 404 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 XPNPEP2O43895 674 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 RNASEH1O60930 286 aaKnown RBP3.9□□□□□ -1.79
HTT-210ENST00000512909 DEXIO95424 95 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 RPN1P04843 607 aaKnown RBP3.9□□□□□ -1.79
HTT-210ENST00000512909 OR52Z1P0C646 297 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 IRF2P14316 349 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 PSMA3P25788 255 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 RFC2P35250 354 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 RPL21P46778 160 aaKnown RBP3.9□□□□□ -1.79
HTT-210ENST00000512909 THOP1P52888 689 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 RUNX1T1Q06455 604 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 CEP55Q53EZ4 464 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 SPOUT1Q5T280 376 aaKnown RBP3.9□□□□□ -1.79
HTT-210ENST00000512909 METTL7BQ6UX53 244 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 MIER3Q7Z3K6 550 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 GALNTL5Q7Z4T8 443 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 PLD3Q8IV08 490 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 ZNF595Q8IYB9 648 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 MYOCDQ8IZQ8 938 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 BLIDQ8IZY5 108 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 STPG4Q8N801 248 aa3.9□□□□□ -1.79
HTT-210ENST00000512909 FAM184AQ8NB25 1140 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms