RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 ZNF282Q9UDV7 671 aaPredicted RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 DCDC2Q9UHG0 476 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 NXT1Q9UKK6 140 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 POLHQ9Y253 713 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 PTRH2Q9Y3E5 179 aaKnown RBP6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 ASB1Q9Y576 335 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 ANGPTL3Q9Y5C1 460 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SLC22A7Q9Y694 548 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 SPTBP11277 2137 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 ANKRD12Q6UB98 2062 aa6.8□□□□□ -1.32
PDLIM5-215ENST00000511586 LAMA5O15230 3695 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 IGLV3-12A0A075B6K2 115 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 ANKDD1BA6NHY2 528 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 LRRC14BA6NHZ5 514 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 VSTM2BA6NLU5 285 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 HMGB1P1B2RPK0 211 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 STX16-NPEPL1H3BU86 382 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 TK2O00142 265 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 E2F3O00716 465 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 STX16O14662 325 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 FOXS1O43638 330 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 PRAMEF4O60810 478 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 WFS1O76024 890 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 SIX3O95343 332 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 NSA2O95478 260 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 SERPINA6P08185 405 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 ZGLP1P0C6A0 271 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 EPORP19235 508 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 TAC1P20366 129 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 EEF1DP29692 281 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 HPDP32754 393 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 CCR10P46092 362 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 CCT5P48643 541 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 STXBP1P61764 594 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 SKP1P63208 163 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 GABPB1Q06547 395 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 ZNF844Q08AG5 666 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 CHIT1Q13231 466 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 IL10RAQ13651 578 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 E2F2Q14209 437 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 HERC3Q15034 1050 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 NKG7Q16617 165 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 LINC00303Q3SY05 128 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 FAM69BQ5VUD6 431 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 PRAMEF9Q5VWM5 478 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 NIPAL1Q6NVV3 410 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 ABHD13Q7L211 337 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 RAB43Q86YS6 212 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 IQCKQ8N0W5 287 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 CYP4X1Q8N118 509 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 RIBC1Q8N443 379 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 TMEM151AQ8N4L1 468 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 PTGR2Q8N8N7 351 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 AMER3Q8N944 861 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 LSM14AQ8ND56 463 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 OR9A4Q8NGU2 314 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 OR2Y1Q8NGV0 311 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 OR2W6PQ8NHA6 318 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 FAM76AQ8TAV0 307 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 STT3BQ8TCJ2 826 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 ADAMTS17Q8TE56 1095 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 CREB3L4Q8TEY5 395 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 EXTL1Q92935 676 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 UBE2E3Q969T4 207 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 NACC2Q96BF6 587 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 MIEF2Q96C03 454 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 MOCOSQ96EN8 888 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 IP6K3Q96PC2 410 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 ROPN1BQ9BZX4 212 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 SLC6A16Q9GZN6 736 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 STMN4Q9H169 189 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 ROPN1Q9HAT0 212 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 MKKSQ9NPJ1 570 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 TMEM216Q9P0N5 145 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 TRPC4Q9UBN4 977 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 CTSFQ9UBX1 484 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 ZNF490Q9ULM2 529 aaPredicted RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 MAN2B2Q9Y2E5 1009 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 MRPS2Q9Y399 296 aaKnown RBP6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 NAALAD2Q9Y3Q0 740 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 MAP4K5Q9Y4K4 846 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 KCNMB2Q9Y691 235 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 PTPRQQ9UMZ3 2332 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 ZZEF1O43149 2961 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 CFAP47Q6ZTR5 3102 aa6.79□□□□□ -1.32
PDLIM5-215ENST00000511586 KMT2BQ9UMN6 2715 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 HEATR5BQ9P2D3 2071 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 A8MT66 165 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 FOXO6A8MYZ6 492 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 SGK494L7N484 410 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 AGPSO00116 658 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 PEX12O00623 359 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 ATXN7O15265 892 aaPredicted RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 UGDHO60701 494 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 CNOT3O75175 753 aaKnown RBP6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 GLRA3O75311 464 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 CLEC3AO75596 197 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 KLHL18O94889 574 aa6.78□□□□□ -1.32
PDLIM5-215ENST00000511586 IGHEP01854 428 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms