RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 SLC5A11Q8WWX8 675 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 DHRS1Q96LJ7 313 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 NPY6RQ99463 290 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 FBRSL1Q9HCM7 1045 aaKnown RBP10.27□□□□□ -0.77
NEK1-206ENST00000510533 DNAJC27Q9NZQ0 273 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 MGAT4BQ9UQ53 548 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 EXOSC1Q9Y3B2 195 aaKnown RBP10.27□□□□□ -0.77
NEK1-206ENST00000510533 PCDHGB2Q9Y5G2 931 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 H0YAE9 185 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 PCDHGA12O60330 932 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 SLITRK5O94991 958 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 CLIC3O95833 236 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 GSTT2P0CG29 244 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 LAPTM4AQ15012 233 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 ATP6AP1Q15904 470 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 TMIGD1Q6UXZ0 262 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 TICAM1Q8IUC6 712 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 PLD6Q8N2A8 252 aaKnown RBP10.27□□□□□ -0.77
NEK1-206ENST00000510533 TSPEARQ8WU66 669 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 GPR88Q9GZN0 384 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 MMP27Q9H306 513 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 ENAMQ9NRM1 1142 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 CDC14AQ9UNH5 594 aa10.27□□□□□ -0.77
NEK1-206ENST00000510533 S100A2P29034 98 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 TMBIM6P55061 237 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 CDCA2Q69YH5 1023 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 MMAAQ8IVH4 418 aaKnown RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 PEBP4Q96S96 227 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 DPYSL5Q9BPU6 564 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 NLE1Q9NVX2 485 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 RBPJLQ9UBG7 517 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 GNG8Q9UK08 70 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 KIF1AQ12756 1690 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 UPK3BL1B0FP48 263 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 UPK3BL2E5RIL1 263 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 SCDO00767 359 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 RFPL1O75677 317 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 MATN1P21941 496 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 VAMP1P23763 118 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 MAN2A2P49641 1150 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 ENTPD1P49961 510 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 ZNF45Q02386 682 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 SEC23BQ15437 767 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 LRRC66Q68CR7 880 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 Q6ZVU0 165 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 OSTM1Q86WC4 334 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 TCEANCQ8N8B7 351 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 TXNDC5Q8NBS9 432 aaKnown RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 OR2L2Q8NH16 312 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 SGCDQ92629 289 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 S100A16Q96FQ6 103 aaKnown RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 OR51B5Q9H339 312 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 OR51I1Q9H343 314 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 Q9N2J8 555 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 TBCCD1Q9NVR7 557 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 TMEM248Q9NWD8 314 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 ALKBH4Q9NXW9 302 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 NOTOA8MTQ0 251 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 BHMG1C9JSJ3 638 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 DFNA5O60443 496 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 KCNE1P15382 129 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 ELK4P28324 431 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 CD47Q08722 323 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 INCA1Q0VD86 236 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 TCEAL1Q15170 157 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 MS4A13Q5J8X5 152 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 C6orf183Q5T699 404 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 RNF130Q86XS8 419 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 TFGQ92734 400 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 KCNJ9Q92806 393 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 RNF121Q9H920 327 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 HCN2Q9UL51 889 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 HSPB11Q9Y547 144 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 ZNF487B1APH4 448 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 MT-ND5P03915 603 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 ZNF182P17025 639 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 MAPK3P27361 379 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 GSCP56915 257 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 MAD2L1BPQ15013 274 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 PDGFRLQ15198 375 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 GDF6Q6KF10 455 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 NANOGP8Q6NSW7 305 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 REEP3Q6NUK4 255 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 TREML1Q86YW5 311 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 LNX2Q8N448 690 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 PLEKHO2Q8TD55 490 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 CYB5D2Q8WUJ1 264 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 THEM6Q8WUY1 208 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 OSTF1Q92882 214 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 TRIM43Q96BQ3 446 aaPredicted RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 MUS81Q96NY9 551 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 HERC2P3Q9BVR0 1158 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 NANOGQ9H9S0 305 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 MS4A12Q9NXJ0 267 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 NLGN3Q9NZ94 848 aa10.26□□□□□ -0.77
NEK1-206ENST00000510533 NOP16Q9Y3C1 178 aaKnown RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 CFAP20Q9Y6A4 193 aaKnown RBP10.26□□□□□ -0.77
NEK1-206ENST00000510533 A8MUA0 341 aa10.25□□□□□ -0.77
NEK1-206ENST00000510533 PRAMEF11O60813 436 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms