RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 SLC11A1P49279 550 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 POLR2LP62875 67 aaKnown RBP14.38□□□□□ -0.11
USP38-202ENST00000510377 CDK6Q00534 326 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 GPR17Q13304 367 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 KRT74Q7RTS7 529 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 ZSWIM9Q86XI8 627 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 ZNF614Q8N883 585 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 IL1RAPQ9NPH3 570 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 H3BM21 787 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 LIPAP38571 399 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 RPS13P62277 151 aaKnown RBP14.38□□□□□ -0.11
USP38-202ENST00000510377 ZNF45Q02386 682 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 ZNF181Q2M3W8 571 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 FAM214AQ32MH5 1076 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 PROX2Q3B8N5 592 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 SBSNQ6UWP8 590 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 LUZP2Q86TE4 346 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 RNF130Q86XS8 419 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 CFAP206Q8IYR0 622 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 NAGSQ8N159 534 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 TEX26Q8N6G2 289 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 CELF2-AS1Q8N7Q2 184 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 ZNF366Q8N895 744 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 C17orf50Q8WW18 174 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 RAB8BQ92930 207 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 ZIC5Q96T25 663 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 MCMBPQ9BTE3 642 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 ABCB8Q9NUT2 735 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 TAS2R9Q9NYW1 312 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 SPG21Q9NZD8 308 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 SNX7Q9UNH6 387 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 NUMA1Q14980 2115 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 HAT1O14929 419 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 SMAD6O43541 496 aaKnown RBP14.38□□□□□ -0.11
USP38-202ENST00000510377 STC2O76061 302 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 RTP2Q5QGT7 225 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 DDI2Q5TDH0 399 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 LIPKQ5VXJ0 399 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 THOC6Q86W42 341 aaKnown RBP14.38□□□□□ -0.11
USP38-202ENST00000510377 TCEANCQ8N8B7 351 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 ZNF486Q96H40 463 aaPredicted RBP14.38□□□□□ -0.11
USP38-202ENST00000510377 BBS4Q96RK4 519 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 CCM2Q9BSQ5 444 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 CLMPQ9H6B4 373 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 MYO7AQ13402 2215 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 GON4LQ3T8J9 2241 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 COQ9O75208 318 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 IGLV3-25P01717 112 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 PTNP21246 168 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 RORCP51449 518 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 RPS26P62854 115 aaKnown RBP14.37□□□□□ -0.11
USP38-202ENST00000510377 RING1Q06587 406 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 GPR33Q49SQ1 333 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 ATP13A5Q4VNC0 1218 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 GPRC6AQ5T6X5 926 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 MZT2BQ6NZ67 158 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 MED27Q6P2C8 311 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 USP51Q70EK9 711 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 LRRC70Q7Z2Q7 622 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 WRAP53Q9BUR4 548 aaKnown RBP14.37□□□□□ -0.11
USP38-202ENST00000510377 CPNE5Q9HCH3 593 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 RNF186Q9NXI6 227 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 VNN3Q9NY84 501 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 PTGFRNQ9P2B2 879 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 ZNF222Q9UK12 451 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 MKLN1Q9UL63 735 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 ISPDA4D126 451 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 TMEM221A6NGB7 291 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 PEX11BO96011 259 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 CA5AP35218 305 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 AGAP7PQ5VUJ5 663 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 LAPTM4BQ86VI4 370 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 HOMEZQ8IX15 550 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 DTX3Q8N9I9 347 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 CPPED1Q9BRF8 314 aaPredicted RBP14.37□□□□□ -0.11
USP38-202ENST00000510377 MRPL17Q9NRX2 175 aaKnown RBP14.37□□□□□ -0.11
USP38-202ENST00000510377 AHSPQ9NZD4 102 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 ASF1AQ9Y294 204 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 NEDD8-MDP1E9PL57 170 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 TLR4O00206 839 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 KLK1P06870 262 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 ACRV1P26436 265 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.37□□□□□ -0.11
USP38-202ENST00000510377 OTOP2Q7RTS6 562 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 APCDD1Q8J025 514 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 PARP16Q8N5Y8 322 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 LMNTD1Q8N9Z9 388 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 TANKQ92844 425 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 PLD4Q96BZ4 506 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 IRF2BPLQ9H1B7 796 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 EQTNQ9NQ60 294 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 SLC6A13Q9NSD5 602 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 FAM120CQ9NX05 1096 aaKnown RBP14.37□□□□□ -0.11
USP38-202ENST00000510377 ZNF282Q9UDV7 671 aaPredicted RBP14.37□□□□□ -0.11
USP38-202ENST00000510377 SPATA2Q9UM82 520 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 SLC9A8Q9Y2E8 581 aa14.37□□□□□ -0.11
USP38-202ENST00000510377 A0A1W2PRB8 838 aa14.36□□□□□ -0.11
USP38-202ENST00000510377 DRGXA6NNA5 263 aa14.36□□□□□ -0.11
USP38-202ENST00000510377 TLX2O43763 284 aaPredicted RBP14.36□□□□□ -0.11
USP38-202ENST00000510377 NME6O75414 186 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms