RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ZBTB20Q9HC78 741 aaPredicted RBP12.85□□□□□ -0.35
SNF8-206ENST00000509989 CPSF2Q9P2I0 782 aaKnown RBP12.85□□□□□ -0.35
SNF8-206ENST00000509989 ZNF282Q9UDV7 671 aaPredicted RBP12.85□□□□□ -0.35
SNF8-206ENST00000509989 ZFP69BQ9UJL9 534 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 PADI2Q9Y2J8 665 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 KCNE2Q9Y6J6 123 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 SPTA1P02549 2419 aa12.85□□□□□ -0.35
SNF8-206ENST00000509989 GCN1Q92616 2671 aaKnown RBP12.84□□□□□ -0.35
SNF8-206ENST00000509989 IGHV3-20A0A0C4DH32 117 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 A0A1W2PPM1 405 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 GOLGA8RI6L899 631 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 KLK8O60259 260 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 SH3BGRLO75368 114 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 KLHL18O94889 574 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 SMIM10L1P0DMW3 83 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 MMP11P24347 488 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 EEF1A2Q05639 463 aaKnown RBP12.84□□□□□ -0.35
SNF8-206ENST00000509989 CHIT1Q13231 466 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 FAM53BQ14153 422 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 PFKFB4Q16877 469 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 DEFB134Q4QY38 66 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 TOR1AIP1Q5JTV8 583 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 DCAF10Q5QP82 559 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 ATG9BQ674R7 924 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 ADGRD1Q6QNK2 874 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 LANCL3Q6ZV70 420 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 RAB43Q86YS6 212 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 AFAP1L2Q8N4X5 818 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 CAMKVQ8NCB2 501 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 OR11G2Q8NGC1 345 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 OR2W6PQ8NHA6 318 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 NT5CQ8TCD5 201 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 UTP15Q8TED0 518 aaKnown RBP12.84□□□□□ -0.35
SNF8-206ENST00000509989 UBTD2Q8WUN7 234 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 THAP11Q96EK4 314 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 SMIM10Q96HG1 83 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 AIF1LQ9BQI0 150 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 CRB3Q9BUF7 120 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 SLC6A16Q9GZN6 736 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 ADNPQ9H2P0 1102 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 XPR1Q9UBH6 696 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 TBK1Q9UHD2 729 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 ZNF180Q9UJW8 692 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 C3orf18Q9UK00 162 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 FBXL4Q9UKA2 621 aa12.84□□□□□ -0.35
SNF8-206ENST00000509989 CPAMD8Q8IZJ3 1885 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 A0A1B0GTL3 188 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 ESPNB1AK53 854 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 IDSB3KWA1 339 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 FAM227AF5H4B4 570 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 GALR3O60755 368 aaPredicted RBP12.83□□□□□ -0.36
SNF8-206ENST00000509989 CEACAM4O75871 244 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 BMP10O95393 424 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 NSA2O95478 260 aaKnown RBP12.83□□□□□ -0.36
SNF8-206ENST00000509989 PIM1P11309 404 aaPredicted RBP12.83□□□□□ -0.36
SNF8-206ENST00000509989 GNAZP19086 355 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 GRK3P35626 688 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 SLCO1A2P46721 670 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 CD97P48960 835 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 SERPINB9P50453 376 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 ILF2Q12905 390 aaKnown RBP12.83□□□□□ -0.36
SNF8-206ENST00000509989 SETDB1Q15047 1291 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 ACAP2Q15057 778 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 RBBP7Q16576 425 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 PDK4Q16654 411 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 XKR6Q5GH73 641 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 CDKL4Q5MAI5 379 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 PARP9Q8IXQ6 854 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 TEX9Q8N6V9 391 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 OR51Q1Q8NH59 317 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 RHEBL1Q8TAI7 183 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 PEX11GQ96HA9 241 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 NSUN5Q96P11 429 aaKnown RBP12.83□□□□□ -0.36
SNF8-206ENST00000509989 C17orf62Q9BQA9 187 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 TRIM4Q9C037 500 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 C12orf65Q9H3J6 166 aaKnown RBP12.83□□□□□ -0.36
SNF8-206ENST00000509989 MLXIPLQ9NP71 852 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 TMEM216Q9P0N5 145 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 MAP4K5Q9Y4K4 846 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 CNTRLQ7Z7A1 2325 aa12.83□□□□□ -0.36
SNF8-206ENST00000509989 SMIM23A6NLE4 172 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 B8ZZF3 427 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 AGPSO00116 658 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 PPP6CO00743 305 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 TXNDC9O14530 226 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 CHST10O43529 356 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 CDC123O75794 336 aaPredicted RBP12.82□□□□□ -0.36
SNF8-206ENST00000509989 WFS1O76024 890 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 S100BP04271 92 aaPredicted RBP12.82□□□□□ -0.36
SNF8-206ENST00000509989 SNRPAP09012 282 aaKnown RBP12.82□□□□□ -0.36
SNF8-206ENST00000509989 SLC35G6P0C7Q6 338 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 TNFRSF8P28908 595 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 AHRP35869 848 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 XCR1P46094 333 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 AVPR1BP47901 424 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 PIK3CGP48736 1102 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 EMP2P54851 167 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 OCA2Q04671 838 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 C19orf57Q0VDD7 668 aa12.82□□□□□ -0.36
SNF8-206ENST00000509989 PWP1Q13610 501 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms