RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ANKRD7Q92527 254 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 MR1Q95460 341 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SLC22A18Q96BI1 424 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 TM4SF19Q96DZ7 209 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 NSUN5Q96P11 429 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SARGQ9BW04 601 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SYTL2Q9HCH5 934 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 CUTCQ9NTM9 273 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 GEMIN8Q9NWZ8 242 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 COPG2Q9UBF2 871 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 XPR1Q9UBH6 696 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 ZNF180Q9UJW8 692 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 GDF2Q9UK05 429 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 PTBP2Q9UKA9 531 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 SLC22A14Q9Y267 594 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 MAU2Q9Y6X3 613 aa6.85□□□□□ -1.31
TOPBP1-207ENST00000509162 TNRC6AQ8NDV7 1962 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 IGLV3-12A0A075B6K2 115 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 KCNE1BA0A087WTH5 132 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 A0A087WUV0 522 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 A0A1W2PPM1 405 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 OR2W5A6NFC9 320 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 ZNF860A6NHJ4 632 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 VSTM2BA6NLU5 285 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 C21orf140B9A014 251 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 ATXN7O15265 892 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 KLF4O43474 513 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 JRKO75564 520 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 WDR47O94967 919 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 LTA4HP09960 611 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 IL1RNP18510 177 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 TCN2P20062 427 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 PTPN4P29074 926 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 HNRNPH1P31943 449 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 DEKP35659 375 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 HSD17B3P37058 310 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 HSD17B2P37059 387 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 ATP6V0D1P61421 351 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 ABATP80404 500 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 ATP1A4Q13733 1029 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 LY6DQ14210 128 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 SLBPQ14493 270 aaKnown RBP eCLIP6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 SETDB1Q15047 1291 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 NKG7Q16617 165 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 ERCC6LQ2NKX8 1250 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 COLEC12Q5KU26 742 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 CAPN13Q6MZZ7 669 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 FIGNL1Q6PIW4 674 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 SHISA6Q6ZSJ9 500 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 TTLL10Q6ZVT0 673 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 TRMT10CQ7L0Y3 403 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 MRGPREQ86SM8 312 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 JAZF1Q86VZ6 243 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 MFSD9Q8NBP5 474 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 OR5T3Q8NGG3 340 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 PROKR1Q8TCW9 393 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 MCOLN3Q8TDD5 553 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 ZUFSPQ96AP4 578 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 CLIP3Q96DZ5 547 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 WDR34Q96EX3 536 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 TSPAN17Q96FV3 270 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 KLHL31Q9H511 634 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 LIN7BQ9HAP6 207 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 PELI2Q9HAT8 420 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 FANCEQ9HB96 536 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 ZBTB26Q9HCK0 441 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 RRAGDQ9NQL2 400 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 NUDT4Q9NZJ9 180 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 TCFL5Q9UL49 500 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 CLDN16Q9Y5I7 305 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 HS3ST3B1Q9Y662 390 aa6.84□□□□□ -1.31
TOPBP1-207ENST00000509162 A0A0A6YYC8 382 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 EXOC1LA0A1B0GW35 172 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 TRBC2A0A5B9 178 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 HYKKA2RU49 373 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF891A8MT65 544 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SUPT3HB4E1H0 165 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 I3L1I5 382 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 GOLGA8RI6L899 631 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 E2F3O00716 465 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 PPP6CO00743 305 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SOCS6O14544 535 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 KDM1AO60341 852 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 KATNA1O75449 491 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 RDH16O75452 317 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SUPT3HO75486 399 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 CREG1O75629 220 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 KLHL2O95198 593 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 CCNDBP1O95273 360 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SLU7O95391 586 aaKnown RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 EIF2S1P05198 315 aaKnown RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 CELA2AP08217 269 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 INHBAP08476 426 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 RPS17P08708 135 aaKnown RBP6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 RAB40ALP0C0E4 278 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SMIM10L1P0DMW3 83 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 CRABP2P29373 138 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 PHBP35232 272 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 SLCO1A2P46721 670 aa6.83□□□□□ -1.32
TOPBP1-207ENST00000509162 UCNP55089 124 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms