RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TBCDQ9BTW9 1192 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 SPATA9Q9BWV2 254 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 OR2AG1Q9H205 316 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 DUSP21Q9H596 190 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 IKZF5Q9H5V7 419 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 IL1RAPQ9NPH3 570 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC22A14Q9Y267 594 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 TDRKHQ9Y2W6 561 aaKnown RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 MYO15AQ9UKN7 3530 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 F5P12259 2224 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 M0R3G1 203 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC16A5O15375 505 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 GSTM1P09488 218 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 CYP2A7P20853 494 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 HTR1BP28222 390 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 DRD3P35462 400 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 GPR1P46091 355 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC6A12P48065 614 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 IL5RAQ01344 420 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SRSF11Q05519 484 aaKnown RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SP140Q13342 867 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 ITGADQ13349 1161 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 CTF1Q16619 201 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 TRIM16LQ309B1 348 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 OR2T5Q6IEZ7 315 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 CAPN13Q6MZZ7 669 aaPredicted RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SUSD1Q6UWL2 747 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC16A12Q6ZSM3 486 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 TRIM73Q86UV7 250 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 TRAPPC5Q8IUR0 188 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 TMCO5AQ8N6Q1 288 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 PLA2G15Q8NCC3 412 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 OR2T29Q8NH02 315 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 MCOLN3Q8TDD5 553 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 CSGALNACT1Q8TDX6 532 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SELENOMQ8WWX9 145 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 CCM2Q9BSQ5 444 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 MROQ9BYG7 248 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 ASPSCR1Q9BZE9 553 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 ELOVL6Q9H5J4 265 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SERHLQ9NQF3 203 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 ATAD3AQ9NVI7 634 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SERGEFQ9UGK8 458 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 TMEFF2Q9UIK5 374 aaPredicted RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 ATG2BQ96BY7 2078 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC5A10A0PJK1 596 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 PTGES3LE9PB15 166 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 C1QTNF3-AMACRE9PGA6 284 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 QSOX1O00391 747 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 MID1O15344 667 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 PRAMEF4O60810 478 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 HOXB9P17482 250 aaPredicted RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 PRPS1L1P21108 318 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 FPR1P21462 350 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 ACVR2AP27037 513 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 BDKRB1P46663 353 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 ST13P50502 369 aaKnown RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 IST1P53990 364 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 GP2P55259 537 aaKnown RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SEC13P55735 322 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 EMX1Q04741 257 aaPredicted RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 CBX3Q13185 183 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 CCDC85BQ15834 202 aaPredicted RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 SYT6Q5T7P8 510 aaPredicted RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 PIP5KL1Q5T9C9 394 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 PRAMEF9Q5VWM5 478 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 LAIR2Q6ISS4 152 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 CES5AQ6NT32 575 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 DSG4Q86SJ6 1040 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 TSPYL5Q86VY4 417 aaPredicted RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 ZNF547Q8IVP9 402 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 KRTCAP2Q8N6L1 136 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 L3MBTL4Q8NA19 623 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 FAR1Q8WVX9 515 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 NELL1Q92832 810 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 ELSPBP1Q96BH3 223 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 HHIPQ96QV1 700 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 DGCR6LQ9BY27 220 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 CCDC90BQ9GZT6 254 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 S1PR5Q9H228 398 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 FBXO8Q9NRD0 319 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 PCYT1BQ9Y5K3 369 aaPredicted RBP10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 STON1Q9Y6Q2 735 aa10.62□□□□□ -0.71
SH3RF1-203ENST00000508685 VCANP13611 3396 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 RFXANKO14593 260 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 LILRB5O75023 590 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 PSIP1O75475 530 aaKnown RBP10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 JRKO75564 520 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 TFPTP0C1Z6 253 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 NEK2P51955 445 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 AP1S2P56377 157 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 PFN3P60673 137 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 MTAPQ13126 283 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 SPCS2Q15005 226 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 ITPRIPL2Q3MIP1 535 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 ZNF658BQ4V348 819 aaPredicted RBP10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 KDM4DQ6B0I6 523 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 PIWIL3Q7Z3Z3 882 aaKnown RBP10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 IGFN1Q86VF2 1251 aa10.61□□□□□ -0.71
SH3RF1-203ENST00000508685 NLRP8Q86W28 1048 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms