RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TMEM79Q9BSE2 394 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 EFCAB11Q9BUY7 163 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 ALG9Q9H6U8 611 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 RIC8BQ9NVN3 520 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 ZNF180Q9UJW8 692 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 MRPS2Q9Y399 296 aaKnown RBP18.83■□□□□ 0.6
SFXN1-209ENST00000508290 HELZ2Q9BYK8 2649 aaKnown RBP18.83■□□□□ 0.6
SFXN1-209ENST00000508290 LOC102723996A0A087X1L8 192 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 K7EM74 188 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 KLHL18O94889 574 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 PDGFAP04085 211 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 C2P06681 752 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 ABHD2P08910 425 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 ICAM2P13598 275 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 ITGA3P26006 1051 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 TYK2P29597 1187 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 AGTR2P50052 363 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 STXBP1P61764 594 aaKnown RBP18.82■□□□□ 0.6
SFXN1-209ENST00000508290 MEF2AQ02078 507 aaPredicted RBP18.82■□□□□ 0.6
SFXN1-209ENST00000508290 TLE1Q04724 770 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 RBBP5Q15291 538 aaKnown RBP18.82■□□□□ 0.6
SFXN1-209ENST00000508290 TBCCQ15814 346 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 LGSNQ5TDP6 509 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 METTL2BQ6P1Q9 378 aaKnown RBP18.82■□□□□ 0.6
SFXN1-209ENST00000508290 OR51Q1Q8NH59 317 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 ZCCHC10Q8TBK6 192 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 UBTD2Q8WUN7 234 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 ISL2Q96A47 359 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 WDR34Q96EX3 536 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 PTCD3Q96EY7 689 aaKnown RBP18.82■□□□□ 0.6
SFXN1-209ENST00000508290 ATOH8Q96SQ7 321 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 CD244Q9BZW8 370 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 SLC6A16Q9GZN6 736 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 LHPPQ9H008 270 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 EPN3Q9H201 632 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 IGSF5Q9NSI5 407 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 MKL2Q9ULH7 1088 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 NAALAD2Q9Y3Q0 740 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 GCN1Q92616 2671 aaKnown RBP18.82■□□□□ 0.6
SFXN1-209ENST00000508290 BAHCC1Q9P281 2608 aa18.82■□□□□ 0.6
SFXN1-209ENST00000508290 A0A088AWK7 358 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 A0A096LPK6 155 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 NSG1A0A0A6YYJ2 146 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 TAPBPO15533 448 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 GALR3O60755 368 aaPredicted RBP18.81■□□□□ 0.6
SFXN1-209ENST00000508290 KLHL2O95198 593 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 SERPIND1P05546 499 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 C8orf89P0DMQ9 161 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 NR1D1P20393 614 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 ZNF10P21506 573 aaPredicted RBP18.81■□□□□ 0.6
SFXN1-209ENST00000508290 JAK1P23458 1154 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 GDF5P43026 501 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 MSH2P43246 934 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 XCR1P46094 333 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 HSPA7P48741 367 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 FOXL2P58012 376 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 AGAP7PQ5VUJ5 663 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 TMEM205Q6UW68 189 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 RIPOR1Q6ZS17 1223 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 LAPTM4BQ86VI4 370 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 PRSS58Q8IYP2 241 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 ZNF740Q8NDX6 193 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 UBE2E3Q969T4 207 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 AGAP4Q96P64 663 aa18.81■□□□□ 0.6
SFXN1-209ENST00000508290 UNKQ9C0B0 810 aaKnown RBP18.81■□□□□ 0.6
SFXN1-209ENST00000508290 HMX2A2RU54 273 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 SUPT3HB4E1H0 165 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 SGK494L7N484 410 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 ALOX12BO75342 701 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 SUPT3HO75486 399 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 CLEC3AO75596 197 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 WISP1O95388 367 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 COL6A2P12110 1019 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 SERPINB1P30740 379 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 MAT1AQ00266 395 aaKnown RBP18.8■□□□□ 0.6
SFXN1-209ENST00000508290 PCDH1Q08174 1060 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 BMPR2Q13873 1038 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 SLBPQ14493 270 aaKnown RBP eCLIP18.8■□□□□ 0.6
SFXN1-209ENST00000508290 HIST2H2ACQ16777 129 aaPredicted RBP18.8■□□□□ 0.6
SFXN1-209ENST00000508290 TSNAXIP1Q2TAA8 658 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 HIST2H2AA3Q6FI13 130 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 KBTBD2Q8IY47 623 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 CENPLQ8N0S6 344 aaPredicted RBP18.8■□□□□ 0.6
SFXN1-209ENST00000508290 SNX31Q8N9S9 440 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 ANKRD53Q8N9V6 530 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 PNPLA2Q96AD5 504 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 MRRFQ96E11 262 aaKnown RBP18.8■□□□□ 0.6
SFXN1-209ENST00000508290 PAFAH2Q99487 392 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 MACROD1Q9BQ69 325 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 ZNF700Q9H0M5 742 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 SPNS1Q9H2V7 528 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 ZNF552Q9H707 407 aaPredicted RBP18.8■□□□□ 0.6
SFXN1-209ENST00000508290 OPTCQ9UBM4 332 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 TMCO1Q9UM00 188 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 NFU1Q9UMS0 254 aa18.8■□□□□ 0.6
SFXN1-209ENST00000508290 TNPO3Q9Y5L0 923 aaKnown RBP18.8■□□□□ 0.6
SFXN1-209ENST00000508290 MDC1Q14676 2089 aaKnown RBP18.79■□□□□ 0.6
SFXN1-209ENST00000508290 IGHV1-45A0A0A0MS14 117 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 SYNDIG1LA6NDD5 238 aa18.79■□□□□ 0.6
SFXN1-209ENST00000508290 ANKDD1BA6NHY2 528 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms