RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	PDSS2	Q86YH6	399 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	ZC3H7A	Q8IWR0	971 aa	Known RBP	13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	ANKRD53	Q8N9V6	530 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	PDPR	Q8NCN5	879 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	LRRN4CL	Q8ND94	238 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	OR11G2	Q8NGC1	345 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	OR51Q1	Q8NH59	317 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	VPS50	Q96JG6	964 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	MFRP	Q9BY79	579 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	TGIF2	Q9GZN2	237 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	EPN3	Q9H201	632 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	VPS11	Q9H270	941 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	DNAJC11	Q9NVH1	559 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	PTBP2	Q9UKA9	531 aa	Known RBP	13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459	MKL2	Q9ULH7	1088 aa		13.4	□□□□□ -0.26
CCHCR1-222	ENST00000507459		A0A096LPK6	155 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	UBXN8	O00124	270 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CLGN	O14967	610 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	KERA	O60938	352 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	IPO13	O94829	963 aa	Known RBP	13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	KLHL18	O94889	574 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	BMP10	O95393	424 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ZNF888	P0CJ79	500 aa	Predicted RBP	13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	AHR	P35869	848 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	GGT5	P36269	586 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	MSH2	P43246	934 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	XCR1	P46094	333 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SERPINB8	P50452	374 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	EEF1A2	Q05639	463 aa	Known RBP	13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SLBP	Q14493	270 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	MYBPC3	Q14896	1274 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	HERC3	Q15034	1050 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	FAM83E	Q2M2I3	478 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	MINDY4	Q4G0A6	757 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	DEFB134	Q4QY38	66 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CDKL4	Q5MAI5	379 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ATG9B	Q674R7	924 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	KLHDC8A	Q8IYD2	350 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CENPL	Q8N0S6	344 aa	Predicted RBP	13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SLC44A1	Q8WWI5	657 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CCT6B	Q92526	530 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PAFAH2	Q99487	392 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CAPS2	Q9BXY5	557 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	FUT8	Q9BYC5	575 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ZNF160	Q9HCG1	818 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PRM3	Q9NNZ6	103 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	NUDT4	Q9NZJ9	180 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PCDHGB7	Q9Y5F8	929 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SLC22A7	Q9Y694	548 aa		13.39	□□□□□ -0.27
CCHCR1-222	ENST00000507459		A0A087WUV0	522 aa	Predicted RBP	13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	OR2W5	A6NFC9	320 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	DPM1	O60762	260 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ALDOA	P04075	364 aa	Known RBP	13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ALOX12	P18054	663 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	AGTR2	P50052	363 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	RAB8A	P61006	207 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	OLR1	P78380	273 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PDK4	Q16654	411 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	XKR6	Q5GH73	641 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	VWA5B1	Q5TIE3	1220 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	IRAK1BP1	Q5VVH5	260 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TMIGD1	Q6UXZ0	262 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ABHD13	Q7L211	337 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CCDC91	Q7Z6B0	441 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	KRT78	Q8N1N4	520 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TRPV3	Q8NET8	790 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	OR5T3	Q8NGG3	340 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	NT5C	Q8TCD5	201 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	METTL21A	Q8WXB1	218 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PEX11G	Q96HA9	241 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	THOC3	Q96J01	351 aa	Known RBP	13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ATOH8	Q96SQ7	321 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SMAD5	Q99717	465 aa	Known RBP	13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	RBCK1	Q9BYM8	510 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CD244	Q9BZW8	370 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	KLHL31	Q9H511	634 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ZNF552	Q9H707	407 aa	Predicted RBP	13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	GPRC5B	Q9NZH0	403 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	LUZP4	Q9P127	313 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ASB1	Q9Y576	335 aa		13.38	□□□□□ -0.27
CCHCR1-222	ENST00000507459	BAHCC1	Q9P281	2608 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	NSG1	A0A0A6YYJ2	146 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	URAD	A6NGE7	173 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	KLHL41	O60662	606 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	GALR3	O60755	368 aa	Predicted RBP	13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PRAMEF4	O60810	478 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	DNAJB6	O75190	326 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CDC123	O75794	336 aa	Predicted RBP	13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	KLHL2	O95198	593 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	HP	P00738	406 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ALPP	P05187	535 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	COX6A1	P12074	109 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SERPINB9	P50453	376 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	EFNA3	P52797	238 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	MLLT10	P55197	1068 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ACAP2	Q15057	778 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TOR1AIP1	Q5JTV8	583 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PRAMEF9	Q5VWM5	478 aa		13.37	□□□□□ -0.27
CCHCR1-222	ENST00000507459	KLC3	Q6P597	504 aa		13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms