RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 GPAT4Q86UL3 456 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SERINC5Q86VE9 423 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 NUDT13Q86X67 352 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 ECHDC2Q86YB7 292 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TMEM126BQ8IUX1 230 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SLC15A3Q8IY34 581 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 ABRAQ8N0Z2 381 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 PLD5Q8N7P1 536 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 ZNF611Q8N823 705 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 BCORP1Q8N888 145 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 ANKFN1Q8N957 763 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TERB1Q8NA31 727 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 ABHD11Q8NFV4 315 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 OR2T3Q8NH03 318 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SLCO4A1Q96BD0 722 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 OTULINQ96BN8 352 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CCDC124Q96CT7 223 aaKnown RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 RRNAD1Q96FB5 475 aaKnown RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SNF8Q96H20 258 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 VCPIP1Q96JH7 1222 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 MS4A10Q96PG2 267 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TEFMQ96QE5 360 aaKnown RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 PANX3Q96QZ0 392 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 NPAS1Q99742 590 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 CITED1Q99966 193 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SLCO5A1Q9H2Y9 848 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TUBB1Q9H4B7 451 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 APMAPQ9HDC9 416 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 DMAP1Q9NPF5 467 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 TRIM36Q9NQ86 728 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 DPP3Q9NY33 737 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 KLQ9UEF7 1012 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 DDX19BQ9UMR2 479 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 PSMD13Q9UNM6 376 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 ERVK-19Q9WJR5 959 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 KCNK6Q9Y257 313 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 FOXA2Q9Y261 457 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 WBP11Q9Y2W2 641 aaKnown RBP3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 LRP12Q9Y561 859 aa3.45□□□□□ -1.86
HMGB3P15-201ENST00000507326 SF3B1O75533 1304 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 FRMPD4Q14CM0 1322 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 TTC21AQ8NDW8 1320 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 KIF27Q86VH2 1401 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 IGKV2D-30A0A075B6S6 120 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 LOC105369274A0A096LPK9 316 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 A0A0A6YYC8 382 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 LOC102723532A0A0G2JNH3 316 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 A0A1W2PPM1 405 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 MAGEA13PA6NCF6 341 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 CENPBD1B2RD01 187 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 GOLGA8MH3BSY2 632 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 I3L1I5 382 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 SNAP23O00161 211 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 EEF2KO00418 725 aaKnown RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 ADAM10O14672 748 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 ZNF197O14709 1029 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 ANKRD28O15084 1053 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 CTDSPLO15194 276 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 CHADO15335 359 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 RNF13O43567 381 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 SELENOFO60613 162 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 SNNO75324 88 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 CBR3O75828 277 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 SORBS2O94875 1100 aaKnown RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 RPP14O95059 124 aaKnown RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 ZBTB11O95625 1053 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 SFTPBP07988 381 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 MMP10P09238 476 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 ALOX5P09917 674 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 PLA2G4BP0C869 781 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 PNMTP11086 282 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 TNNI1P19237 187 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 NT5EP21589 574 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 PAICSP22234 425 aaKnown RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 DPP4P27487 766 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 PPIFP30405 207 aaKnown RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 HOXC9P31274 260 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 CCKARP32238 428 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 EVI2BP34910 448 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 RORAP35398 523 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 DLSTP36957 453 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 HSD17B3P37058 310 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 CRATP43155 626 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 MTNR1AP48039 350 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 CCNG1P51959 295 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 NLRP11P59045 1033 aaKnown RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 RPL15P61313 204 aaKnown RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 RPS15P62841 145 aaKnown RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 MRPS25P82663 173 aaKnown RBP3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 LGALS3BPQ08380 585 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 PRKAA1Q13131 559 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 GPR176Q14439 515 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 MESDQ14696 234 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 ACKR1Q16570 336 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 CA9Q16790 459 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 PARP6Q2NL67 630 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 USP41Q3LFD5 358 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 TBC1D25Q3MII6 688 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 EPC2Q52LR7 807 aa3.44□□□□□ -1.86
HMGB3P15-201ENST00000507326 C6orf10Q5SRN2 563 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms