RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 SCTRP47872 440 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 ITGA8P53708 1063 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 SLC12A2P55011 1212 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 RBPJQ06330 500 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 ZNF33BQ06732 778 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 ACTN3Q08043 901 aaPredicted RBP13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 NSDHLQ15738 373 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 MEP1AQ16819 746 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 H3F3CQ6NXT2 135 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 MTFR2Q6P444 385 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 MBOAT1Q6ZNC8 495 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 ANKRD37Q7Z713 158 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 IGDCC3Q8IVU1 814 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 SLC34A3Q8N130 599 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 SLC5A8Q8N695 610 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 KCT2Q8NC54 265 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 ZCCHC10Q8TBK6 192 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 TBC1D20Q96BZ9 403 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 CAPZA3Q96KX2 299 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 PITHD1Q9GZP4 211 aaPredicted RBP13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 MOCS1Q9NZB8 636 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 HCN3Q9P1Z3 774 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 NAALAD2Q9Y3Q0 740 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 SVILO95425 2214 aa13.61□□□□□ -0.23
HMGCS1-203ENST00000507004 ZGRF1Q86YA3 2104 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 EIF3HO15372 352 aaKnown RBP eCLIP13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 GALR3O60755 368 aaPredicted RBP13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 H2AFYO75367 372 aaKnown RBP13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 RDH16O75452 317 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 BANF1O75531 89 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 WDPCPO95876 746 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 FHP07954 510 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 PDIA2Q13087 525 aaKnown RBP13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 CALCOCO2Q13137 446 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 CDKL4Q5MAI5 379 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 ZNF324BQ6AW86 544 aaPredicted RBP13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 TRMT10BQ6PF06 316 aaKnown RBP13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 SBSNQ6UWP8 590 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 FRA10AC1Q70Z53 315 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 MAATS1Q7Z4T9 603 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 ZC3HC1Q86WB0 502 aaKnown RBP13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 TCAIMQ8N3R3 496 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 ARMC2Q8NEN0 867 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 PYCR2Q96C36 320 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 TSPAN17Q96FV3 270 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 MESP1Q9BRJ9 268 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 KCNF1Q9H3M0 494 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 RHOJQ9H4E5 214 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 KCNK13Q9HB14 408 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 TXNDC16Q9P2K2 825 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 OSGIN2Q9Y236 505 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 OARD1Q9Y530 152 aa13.6□□□□□ -0.23
HMGCS1-203ENST00000507004 SCN2AQ99250 2005 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 A0A088AWK7 358 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 FAM95CA0A1B0GW59 222 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 FAM187AA6NFU0 413 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 PSMD12O00232 456 aaPredicted RBP13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 TTI1O43156 1089 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 SEC24DO94855 1032 aaPredicted RBP13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 GUCA1CO95843 209 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 SERPINA6P08185 405 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 GNAZP19086 355 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 ZNF10P21506 573 aaPredicted RBP13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 STXBP1P61764 594 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 REEP5Q00765 189 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 POU4F1Q01851 419 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 ABRAXAS2Q15018 415 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 PPP1R3AQ16821 1122 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 ACER2Q5QJU3 275 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 PAPD4Q6PIY7 484 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 NXPE4Q6UWF7 544 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 QSOX2Q6ZRP7 698 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 CYS1Q717R9 158 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 PRSS41Q7RTY9 318 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 THOC6Q86W42 341 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 FAM98AQ8NCA5 519 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 ZNF740Q8NDX6 193 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 FBXO36Q8NEA4 188 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 C7orf57Q8NEG2 295 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 ADAMTS18Q8TE60 1221 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 NEIL2Q969S2 332 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 RELTQ969Z4 430 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 PEX11GQ96HA9 241 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 OR4K3Q96R72 315 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 OLFM1Q99784 485 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 EGFL8Q99944 293 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 UTP23Q9BRU9 249 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 RUBCNLQ9H714 662 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 CNOT10Q9H9A5 744 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 PLAC1Q9HBJ0 212 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 PLA2G3Q9NZ20 509 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 GPRC5BQ9NZH0 403 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 SUCOQ9UBS9 1254 aaKnown RBP13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 CTNNAL1Q9UBT7 734 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 SH2B3Q9UQQ2 575 aa13.59□□□□□ -0.23
HMGCS1-203ENST00000507004 DIDO1Q9BTC0 2240 aaKnown RBP13.58□□□□□ -0.24
HMGCS1-203ENST00000507004 A1L4Q6 167 aa13.58□□□□□ -0.24
HMGCS1-203ENST00000507004 A8MUI8 341 aa13.58□□□□□ -0.24
HMGCS1-203ENST00000507004 LRRTM2O43300 516 aa13.58□□□□□ -0.24
HMGCS1-203ENST00000507004 SERPIND1P05546 499 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms