RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 CCT6BQ92526 530 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 SPSB2Q99619 263 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 MRPL57Q9BQC6 102 aaKnown RBP18.35■□□□□ 0.53
LMNA-221ENST00000506981 CRB3Q9BUF7 120 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 ZNF358Q9NW07 568 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 TUBD1Q9UJT1 453 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 G3BP2Q9UN86 482 aaKnown RBP18.35■□□□□ 0.53
LMNA-221ENST00000506981 MRPS2Q9Y399 296 aaKnown RBP18.35■□□□□ 0.53
LMNA-221ENST00000506981 TNPO3Q9Y5L0 923 aaKnown RBP18.35■□□□□ 0.53
LMNA-221ENST00000506981 SLC22A7Q9Y694 548 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 COL6A6A6NMZ7 2263 aa18.35■□□□□ 0.53
LMNA-221ENST00000506981 PIEZO2Q9H5I5 2752 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 TNRC6AQ8NDV7 1962 aaKnown RBP18.34■□□□□ 0.53
LMNA-221ENST00000506981 SMIM23A6NLE4 172 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 VSTM2BA6NLU5 285 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 MKRN2OSH3BPM6 223 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 UMODP07911 640 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 ZGLP1P0C6A0 271 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 HPDP32754 393 aaPredicted RBP18.34■□□□□ 0.53
LMNA-221ENST00000506981 PIK3CGP48736 1102 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 STXBP1P61764 594 aaKnown RBP18.34■□□□□ 0.53
LMNA-221ENST00000506981 ATP1A4Q13733 1029 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 NAA30Q147X3 362 aaPredicted RBP18.34■□□□□ 0.53
LMNA-221ENST00000506981 RBBP7Q16576 425 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 WDR93Q6P2C0 686 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 EMBQ6PCB8 327 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 MED25Q71SY5 747 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 LCA5Q86VQ0 697 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.34■□□□□ 0.53
LMNA-221ENST00000506981 TEX9Q8N6V9 391 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 AMER3Q8N944 861 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 TMEM102Q8N9M5 508 aaPredicted RBP18.34■□□□□ 0.53
LMNA-221ENST00000506981 ANKRD53Q8N9V6 530 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 ACMSDQ8TDX5 336 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 UBE2E3Q969T4 207 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 NACC2Q96BF6 587 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 MOCOSQ96EN8 888 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 SEC16BQ96JE7 1060 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 FER1L6-AS2Q96M78 137 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 MRPL46Q9H2W6 279 aaKnown RBP18.34■□□□□ 0.53
LMNA-221ENST00000506981 NT5DC2Q9H857 520 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 SEMA3GQ9NS98 782 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 ASB1Q9Y576 335 aa18.34■□□□□ 0.53
LMNA-221ENST00000506981 ATRXP46100 2492 aa18.33■□□□□ 0.53
LMNA-221ENST00000506981 DOCK10Q96BY6 2186 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 IGLV3-12A0A075B6K2 115 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 FFAR3O14843 346 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 GPR42O15529 346 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 KLK8O60259 260 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 KLHL18O94889 574 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 SHBGP04278 402 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 SERPINA6P08185 405 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 ALOX12P18054 663 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 MMP11P24347 488 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 HSD17B3P37058 310 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 SLCO1A2P46721 670 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 FOXL2P58012 376 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 KLC1Q07866 573 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 DOC2AQ14183 400 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 TBCCQ15814 346 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 VWA2Q5GFL6 755 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 PTGR2Q8N8N7 351 aaPredicted RBP18.33■□□□□ 0.52
LMNA-221ENST00000506981 EXD3Q8N9H8 876 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 WDR34Q96EX3 536 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 ING2Q9H160 280 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 NAALAD2Q9Y3Q0 740 aa18.33■□□□□ 0.52
LMNA-221ENST00000506981 SGK494L7N484 410 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 RDH16O75452 317 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 ZNF888P0CJ79 500 aaPredicted RBP18.32■□□□□ 0.52
LMNA-221ENST00000506981 KRT15P19012 456 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 TAC1P20366 129 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 ARL1P40616 181 aaPredicted RBP18.32■□□□□ 0.52
LMNA-221ENST00000506981 HNF4AP41235 474 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 MAT1AQ00266 395 aaKnown RBP18.32■□□□□ 0.52
LMNA-221ENST00000506981 CHAF1BQ13112 559 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 PCBP2Q15366 365 aaKnown RBP eCLIP18.32■□□□□ 0.52
LMNA-221ENST00000506981 SYT16Q17RD7 645 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 ERCC6LQ2NKX8 1250 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 TOR1AIP1Q5JTV8 583 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 MFSD4BQ5TF39 518 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 CPZQ66K79 652 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 METTL2BQ6P1Q9 378 aaKnown RBP18.32■□□□□ 0.52
LMNA-221ENST00000506981 PRSS41Q7RTY9 318 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 PPP1R32Q7Z5V6 425 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 MYLK4Q86YV6 388 aaPredicted RBP18.32■□□□□ 0.52
LMNA-221ENST00000506981 C9orf43Q8TAL5 461 aaPredicted RBP18.32■□□□□ 0.52
LMNA-221ENST00000506981 SLC6A16Q9GZN6 736 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 P4HTMQ9NXG6 502 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 HCN3Q9P1Z3 774 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 COPG2Q9UBF2 871 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 C3orf18Q9UK00 162 aa18.32■□□□□ 0.52
LMNA-221ENST00000506981 ATMQ13315 3056 aa18.31■□□□□ 0.52
LMNA-221ENST00000506981 STX16-NPEPL1H3BU86 382 aa18.31■□□□□ 0.52
LMNA-221ENST00000506981 GOLGA8RI6L899 631 aa18.31■□□□□ 0.52
LMNA-221ENST00000506981 STX16O14662 325 aa18.31■□□□□ 0.52
LMNA-221ENST00000506981 CLEC3AO75596 197 aa18.31■□□□□ 0.52
LMNA-221ENST00000506981 HEXBP07686 556 aa18.31■□□□□ 0.52
LMNA-221ENST00000506981 GSTA1P08263 222 aa18.31■□□□□ 0.52
LMNA-221ENST00000506981 EEF1DP29692 281 aaKnown RBP18.31■□□□□ 0.52
LMNA-221ENST00000506981 EMP2P54851 167 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms