RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 HS6ST1O60243 411 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 NME2P1O60361 137 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 NIPSNAP2O75323 286 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 RDH16O75452 317 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 ZWINTO95229 277 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 MATN4O95460 622 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 CYC1P08574 325 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 NME2P22392 152 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 TPP2P29144 1249 aaPredicted RBP8.63□□□□□ -1.03
PTPN20-216ENST00000506080 FMO4P31512 558 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 MEOX1P50221 254 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 PNLIPRP1P54315 467 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 NAP1L1P55209 391 aaKnown RBP8.63□□□□□ -1.03
PTPN20-216ENST00000506080 SLC26A5P58743 744 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 FOXD4Q12950 439 aaPredicted RBP8.63□□□□□ -1.03
PTPN20-216ENST00000506080 USP10Q14694 798 aaKnown RBP8.63□□□□□ -1.03
PTPN20-216ENST00000506080 ABRAXAS2Q15018 415 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 NSDHLQ15738 373 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 CEBPEQ15744 281 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 ACSBG2Q5FVE4 666 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 CTSL3PQ5NE16 218 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 THEMIS2Q5TEJ8 643 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 TMEM211Q6ICI0 200 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 RPS19BP1Q86WX3 136 aaKnown RBP8.63□□□□□ -1.03
PTPN20-216ENST00000506080 OTUD6BQ8N6M0 293 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 CHDHQ8NE62 594 aaPredicted RBP8.63□□□□□ -1.03
PTPN20-216ENST00000506080 PPHLN1Q8NEY8 458 aaKnown RBP8.63□□□□□ -1.03
PTPN20-216ENST00000506080 RND1Q92730 232 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 CCDC138Q96M89 665 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 PRAP1Q96NZ9 151 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 PKP4Q99569 1192 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 LPAR4Q99677 370 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 OLFM1Q99784 485 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 FOXC2Q99958 501 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 CXXC4Q9H2H0 198 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 LIME1Q9H400 295 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 GALPQ9UBC7 116 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 KCNN3Q9UGI6 736 aa8.63□□□□□ -1.03
PTPN20-216ENST00000506080 TCRBV7S2A1N4TA0A589 114 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 ZNF860A6NHJ4 632 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 USP27XA6NNY8 438 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 TMEM229AB2RXF0 380 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 AKR1B15C9JRZ8 316 aaPredicted RBP8.62□□□□□ -1.03
PTPN20-216ENST00000506080 MYO1CO00159 1063 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 FAM155BO75949 473 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 PDE9AO76083 593 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 SYF2O95926 243 aaKnown RBP8.62□□□□□ -1.03
PTPN20-216ENST00000506080 IGHA1P01876 353 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 CATP04040 527 aaKnown RBP8.62□□□□□ -1.03
PTPN20-216ENST00000506080 HOXD4P09016 255 aaPredicted RBP8.62□□□□□ -1.03
PTPN20-216ENST00000506080 TFEBP19484 476 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 RPS3P23396 243 aaKnown RBP eCLIP8.62□□□□□ -1.03
PTPN20-216ENST00000506080 BCL6P41182 706 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 CYB561P49447 251 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 ITGA8P53708 1063 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 OR4D2P58180 307 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 CRADDP78560 199 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 RHAGQ02094 409 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 FOLH1Q04609 750 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 PMPCAQ10713 525 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 GBX1Q14549 363 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 KCNJ11Q14654 390 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 ARHGAP19Q14CB8 494 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 KLHL38Q2WGJ6 581 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 VN1R4Q7Z5H5 301 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 PRUNE1Q86TP1 453 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 ZNF227Q86WZ6 799 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 LRRC6Q86X45 466 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 CNGA4Q8IV77 575 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 ZNF480Q8WV37 535 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 TMEM125Q96AQ2 219 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 PEX11GQ96HA9 241 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 SEC16BQ96JE7 1060 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 ANKHQ9HCJ1 492 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 FAM114A2Q9NRY5 505 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 DNAJB12Q9NXW2 375 aaKnown RBP8.62□□□□□ -1.03
PTPN20-216ENST00000506080 DUSP10Q9Y6W6 482 aa8.62□□□□□ -1.03
PTPN20-216ENST00000506080 SCN3AQ9NY46 2000 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 ANKHD1Q8IWZ3 2542 aaKnown RBP8.61□□□□□ -1.03
PTPN20-216ENST00000506080 ABCA2Q9BZC7 2435 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 TMEM200CA6NKL6 621 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 ZNF839A8K0R7 811 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 ERI2A8K979 691 aaKnown RBP8.61□□□□□ -1.03
PTPN20-216ENST00000506080 GOLGA8KD6RF30 607 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 E7ENX8 843 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 GOLGA8TH3BQL2 631 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 PSIP1O75475 530 aaKnown RBP8.61□□□□□ -1.03
PTPN20-216ENST00000506080 SLC16A8O95907 504 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 IFNB1P01574 187 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 BMP4P12644 408 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 CHRM3P20309 590 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 NMBRP28336 390 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 FDFT1P37268 417 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 NR0B1P51843 470 aaKnown RBP8.61□□□□□ -1.03
PTPN20-216ENST00000506080 NUP107P57740 925 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 SESN2P58004 480 aaPredicted RBP8.61□□□□□ -1.03
PTPN20-216ENST00000506080 ABATP80404 500 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 TAP2Q03519 686 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 SPA17Q15506 151 aa8.61□□□□□ -1.03
PTPN20-216ENST00000506080 CMPK2Q5EBM0 449 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms