RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 CLIP4Q8N3C7 705 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 FAM71CQ8NEG0 241 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 OR56B1Q8NGI3 324 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 OR1J1Q8NGS3 322 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 ARHGAP45Q92619 1136 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 RAB7BQ96AH8 199 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 ALKBH7Q9BT30 221 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 TPPP3Q9BW30 176 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 CCSER1Q9C0I3 900 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 MARCH7Q9H992 704 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 FAM207AQ9NSI2 230 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 CENPMQ9NSP4 180 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 NDUFA13Q9P0J0 144 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 MALT1Q9UDY8 824 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 FAM153AQ9UHL3 310 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 WDR37Q9Y2I8 494 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 MRPS2Q9Y399 296 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 A0A1W2PPI3 338 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 CTAGE9A4FU28 777 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 C4orf47A7E2U8 309 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 E5RGE8 158 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 SOCS2O14508 198 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 SYNGR3O43761 229 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 KRT8P05787 483 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 SERPINF2P08697 491 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 GSTA2P09210 222 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 CTAGE8P0CG41 777 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 F3P13726 295 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 GOT1P17174 413 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 SCP2P22307 547 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 CCKBRP32239 447 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 SOX6P35712 828 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 HNMTP50135 292 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 ARFIP1P53367 373 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 CLDN17P56750 224 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 TRA2BP62995 288 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 SSBP2P81877 361 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 ELP6Q0PNE2 266 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 LRRC74AQ0VAA2 488 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 DLG1Q12959 904 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 GAGE5Q13069 117 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 GAGE6Q13070 117 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 NFATC4Q14934 902 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 KIR2DS3Q14952 304 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZC2HC1CQ53FD0 456 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 UGT3A1Q6NUS8 523 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZER1Q7Z7L7 766 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 RTN4RL2Q86UN3 420 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 PLD3Q8IV08 490 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 CTAGE4Q8IX94 777 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 RCOR2Q8IZ40 523 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 RNF149Q8NC42 400 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 SMRP1Q8NCR6 262 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 OR52N5Q8NH56 324 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 GRHL3Q8TE85 626 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 METTL21AQ8WXB1 218 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 HSD17B8Q92506 261 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZBTB9Q96C00 473 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 DTNBP1Q96EV8 351 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 NSL1Q96IY1 281 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 BTBD9Q96Q07 612 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 COQ7Q99807 217 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 NMNAT2Q9BZQ4 307 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 TMEM231Q9H6L2 316 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 A4GALTQ9NPC4 353 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 ACOXLQ9NUZ1 547 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 PANK4Q9NVE7 773 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 TMOD3Q9NYL9 352 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 CNOT2Q9NZN8 540 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 WNT16Q9UBV4 365 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 NSG2Q9Y328 171 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 DDX49Q9Y6V7 483 aaKnown RBP3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 CGNL1Q0VF96 1302 aa3.56□□□□□ -1.84
TRAPPC13-208ENST00000505553 ANTXRLA6NF34 631 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 C2CD4DB7Z1M9 353 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF587BE7ETH6 402 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 H0YCG3 227 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 EEF2KO00418 725 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 CHEK1O14757 476 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 CHUKO15111 745 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 BAG4O95429 457 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 OPN1MWP04001 364 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 CHRNGP07510 517 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 YES1P07947 543 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 OPN1MW2P0DN77 364 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 OPN1MW3P0DN78 364 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 RALAP11233 206 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 CDH1P12830 882 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 KRT13P13646 458 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 PRG2P13727 222 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 HLA-DOBP13765 273 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 FUT1P19526 365 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 ALDH4A1P30038 563 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 AKT2P31751 481 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 HSPA1LP34931 641 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 PITPNBP48739 271 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 CLCN4P51793 760 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 KCNK10P57789 538 aa3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 RPL24P83731 157 aaKnown RBP3.55□□□□□ -1.84
TRAPPC13-208ENST00000505553 PMP22Q01453 160 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms