RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 C17orf53Q8N3J3 647 aaPredicted RBP12.4□□□□□ -0.42
DDX41-204ENST00000504807 OR4K1Q8NGD4 311 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 OR51Q1Q8NH59 317 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 MCOLN3Q8TDD5 553 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 NEIL2Q969S2 332 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 PDLIM2Q96JY6 352 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 TSNARE1Q96NA8 513 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 LANCL2Q9NS86 450 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 C14orf105Q9NVL8 296 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 UTP6Q9NYH9 597 aaKnown RBP12.4□□□□□ -0.42
DDX41-204ENST00000504807 CDC14AQ9UNH5 594 aa12.4□□□□□ -0.42
DDX41-204ENST00000504807 NPEPPSL1A6NEC2 478 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 CXorf49A8MYA2 514 aaPredicted RBP12.39□□□□□ -0.43
DDX41-204ENST00000504807 E7ESA3 106 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 SLC16A5O15375 505 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 WISP3O95389 354 aaPredicted RBP12.39□□□□□ -0.43
DDX41-204ENST00000504807 GUCA1CO95843 209 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 C1QAP02745 245 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 ANXA5P08758 320 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 HTR1EP28566 365 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 XCR1P46094 333 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 TDGF1P3P51864 188 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 TAS2R39P59534 338 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 HYAL2Q12891 473 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 CDC16Q13042 620 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 CAPN12Q6ZSI9 719 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 ANKRD37Q7Z713 158 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 ASPGQ86U10 573 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 ZC3HC1Q86WB0 502 aaKnown RBP12.39□□□□□ -0.43
DDX41-204ENST00000504807 C17orf64Q86WR6 236 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 AFAP1L2Q8N4X5 818 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 ANKRD53Q8N9V6 530 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 MFSD9Q8NBP5 474 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 FBXO36Q8NEA4 188 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 ABHD11Q8NFV4 315 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 TM9SF4Q92544 642 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 TSLPQ969D9 159 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 FBXL8Q96CD0 374 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 CYTH2Q99418 400 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 PPANQ9NQ55 473 aaKnown RBP12.39□□□□□ -0.43
DDX41-204ENST00000504807 AGPAT4Q9NRZ5 378 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 ARL15Q9NXU5 204 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 MOCS1Q9NZB8 636 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 VWA7Q9Y334 891 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 SNX24Q9Y343 169 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 NAALAD2Q9Y3Q0 740 aa12.39□□□□□ -0.43
DDX41-204ENST00000504807 KLF2Q9Y5W3 355 aaPredicted RBP12.39□□□□□ -0.43
DDX41-204ENST00000504807 H0YIG0 161 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 PRAMEF4O60810 478 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 CDC123O75794 336 aaPredicted RBP12.38□□□□□ -0.43
DDX41-204ENST00000504807 WDPCPO95876 746 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 C8orf89P0DMQ9 161 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 CD1EP15812 388 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 ZNF37AP17032 561 aaPredicted RBP12.38□□□□□ -0.43
DDX41-204ENST00000504807 SAT1P21673 171 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 RGS4P49798 205 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 TNFSF10P50591 281 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 IL2P60568 153 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 RHAGQ02094 409 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 PDIA2Q13087 525 aaKnown RBP12.38□□□□□ -0.43
DDX41-204ENST00000504807 PDAP1Q13442 181 aaKnown RBP12.38□□□□□ -0.43
DDX41-204ENST00000504807 MINDY4Q4G0A6 757 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 PRAMEF9Q5VWM5 478 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 CAPN13Q6MZZ7 669 aaPredicted RBP12.38□□□□□ -0.43
DDX41-204ENST00000504807 FAM45BPQ6NSW5 357 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 PCGF5Q86SE9 256 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 PDIK1LQ8N165 341 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 SPATA6LQ8N4H0 392 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 OR1N1Q8NGS0 311 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 FAM45AQ8TCE6 357 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 SLC13A3Q8WWT9 602 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 SNF8Q96H20 258 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 PEX11GQ96HA9 241 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 LMF1Q96S06 567 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 KRT12Q99456 494 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 NAPGQ99747 312 aaPredicted RBP12.38□□□□□ -0.43
DDX41-204ENST00000504807 SLX1AQ9BQ83 275 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 NAT9Q9BTE0 207 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 SARGQ9BW04 601 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 KLHL31Q9H511 634 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 EPS8L2Q9H6S3 715 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 CAB39LQ9H9S4 337 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 CHST11Q9NPF2 352 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 SCN3AQ9NY46 2000 aa12.38□□□□□ -0.43
DDX41-204ENST00000504807 MAP1AP78559 2803 aaPredicted RBP12.37□□□□□ -0.43
DDX41-204ENST00000504807 FAM95CA0A1B0GW59 222 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 TXNDC9O14530 226 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 PRPF4O43172 522 aaKnown RBP eCLIP12.37□□□□□ -0.43
DDX41-204ENST00000504807 CD99P14209 185 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 MST1P26927 711 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 SSTR2P30874 369 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 GDF5P43026 501 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 AVPR1BP47901 424 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 PMP22Q01453 160 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 FRG1Q14331 258 aaKnown RBP12.37□□□□□ -0.43
DDX41-204ENST00000504807 TLR1Q15399 786 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 TRADDQ15628 312 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 FBXO48Q5FWF7 155 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 DUPD1Q68J44 220 aa12.37□□□□□ -0.43
DDX41-204ENST00000504807 ADNP2Q6IQ32 1131 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms