RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 AHSA2Q719I0 299 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 AMIGO1Q86WK6 493 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 LSMEM2Q8N112 164 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 ZNF563Q8TA94 476 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 EGLN2Q96KS0 407 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 IFT80Q9P2H3 777 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-207ENST00000504761 APOBEC3BQ9UH17 382 aaKnown RBP13.58□□□□□ -0.24
TCOF1-207ENST00000504761 PCDHGB3Q9Y5G1 929 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 TNS1Q9HBL0 1735 aaKnown RBP13.58□□□□□ -0.24
TCOF1-207ENST00000504761 CAPN5O15484 640 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-207ENST00000504761 FADS2O95864 444 aaKnown RBP13.58□□□□□ -0.24
TCOF1-207ENST00000504761 HLA-DQA2P01906 255 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 FGF4P08620 206 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 CD247P20963 164 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 SHMT2P34897 504 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 P2RY2P41231 377 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 ATP4BP51164 291 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 CDK3Q00526 305 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 GALNT1Q10472 559 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-207ENST00000504761 SLC38A2Q96QD8 506 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 PRSS16Q9NQE7 514 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 KLHL1Q9NR64 748 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 MCM8Q9UJA3 840 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 FADS2P1A8MWK0 482 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 KPNA4O00629 521 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-207ENST00000504761 LILRB3O75022 631 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 THEGLP0DJG4 465 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 ARRB1P49407 418 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-207ENST00000504761 CRISP3P54108 245 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 MS4A2Q01362 244 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 MAPK11Q15759 364 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 NEK5Q6P3R8 708 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 APLFQ8IW19 511 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-207ENST00000504761 DNAJB8Q8NHS0 232 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 SNRNP27Q8WVK2 155 aaKnown RBP13.58□□□□□ -0.24
TCOF1-207ENST00000504761 BIRC8Q96P09 236 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 TRIB3Q96RU7 358 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 PDFQ9HBH1 243 aa13.58□□□□□ -0.24
TCOF1-207ENST00000504761 NME6O75414 186 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-207ENST00000504761 HIST1H2ABP04908 130 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 LAMP1P11279 417 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 CCNIQ14094 377 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 RTL10Q7L3V2 364 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 HIST3H2AQ7L7L0 130 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 TRIM73Q86UV7 250 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 ATP6V1C2Q8NEY4 427 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 HIST1H2ACQ93077 130 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 C1QTNF1Q9BXJ1 281 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 RHCGQ9UBD6 479 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 TRBC2A0A5B9 178 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 CHURC1-FNTBB4DL54 471 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 HNRNPCP07910 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
TCOF1-207ENST00000504761 MAOBP27338 520 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 SOX6P35712 828 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 MLLT3P42568 568 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-207ENST00000504761 RAB28P51157 221 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 ZNF77Q15935 545 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 SNAPC1Q16533 368 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 PNCKQ6P2M8 343 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 VRK3Q8IV63 474 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 OR8K5Q8NH50 307 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 MRPS26Q9BYN8 205 aaKnown RBP13.57□□□□□ -0.24
TCOF1-207ENST00000504761 SOX17Q9H6I2 414 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-207ENST00000504761 C8orf33Q9H7E9 229 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-207ENST00000504761 IRAK3Q9Y616 596 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 ZNFX1Q9P2E3 1918 aaKnown RBP13.57□□□□□ -0.24
TCOF1-207ENST00000504761 BTN3A3O00478 584 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 CR2P20023 1033 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 SUOXP51687 545 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 CDH15P55291 814 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 MERTKQ12866 999 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 ABHD13Q7L211 337 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 OR4N5Q8IXE1 308 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 OXR1Q8N573 874 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 SLC38A4Q969I6 547 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 C11orf16Q9NQ32 467 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 SLC2A4RGQ9NR83 387 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 SDR39U1Q9NRG7 319 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-207ENST00000504761 PNO1Q9NRX1 252 aaKnown RBP13.57□□□□□ -0.24
TCOF1-207ENST00000504761 POLR1DQ9Y2S0 133 aa13.57□□□□□ -0.24
TCOF1-207ENST00000504761 CLCN7P51798 805 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 UAP1L1Q3KQV9 507 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 PEX5LQ8IYB4 626 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 SLC34A3Q8N130 599 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 TMIEQ8NEW7 156 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 METTL21AQ8WXB1 218 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 ASB11Q8WXH4 323 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 FBXL8Q96CD0 374 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 HSH2DQ96JZ2 352 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 ZNF570Q96NI8 536 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 APOOQ9BUR5 198 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 FAM192AQ9GZU8 254 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 EPB41L1Q9H4G0 881 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 ERGIC3Q9Y282 383 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 HTRA2O43464 458 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 PCSK2P16519 638 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 TOP3AQ13472 1001 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 IRF4Q15306 451 aa13.56□□□□□ -0.24
TCOF1-207ENST00000504761 LARP4Q71RC2 724 aaKnown RBP eCLIP13.56□□□□□ -0.24
TCOF1-207ENST00000504761 COMMD6Q7Z4G1 85 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms