RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 BNIP3Q12983 259 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 SMPDL3BQ92485 455 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 FCRL3Q96P31 734 aaPredicted RBP16■□□□□ 0.15
PCDHA1-203ENST00000504120 KCNK6Q9Y257 313 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 DLGAP4Q9Y2H0 992 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 FAM72CH0Y354 149 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 PSMD9O00233 223 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 CD1DP15813 335 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ECHS1P30084 290 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 NUDT6P53370 316 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 PPP1R8Q12972 351 aaKnown RBP16■□□□□ 0.15
PCDHA1-203ENST00000504120 DECR1Q16698 335 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 FAM72AQ5TYM5 149 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 FAM72DQ6L9T8 149 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF773Q6PK81 442 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ARL9Q6T311 187 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 GRASPQ7Z6J2 395 aaPredicted RBP16■□□□□ 0.15
PCDHA1-203ENST00000504120 FAM72BQ86X60 149 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 GHDCQ8N2G8 530 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ENDOVQ8N8Q3 282 aaKnown RBP16■□□□□ 0.15
PCDHA1-203ENST00000504120 PLA2G15Q8NCC3 412 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 IGSF21Q96ID5 467 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 CCDC106Q9BWC9 280 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 KCNH6Q9H252 994 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 REEP4Q9H6H4 257 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF639Q9UID6 485 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 MGAT4AQ9UM21 535 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 MGAT4BQ9UQ53 548 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 TMEM98Q9Y2Y6 226 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 C10orf71Q711Q0 1435 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF208O43345 1280 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 S100A6P06703 90 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 PON3Q15166 354 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 TECRLQ5HYJ1 363 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 MOAP1Q96BY2 351 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 MRGPRX2Q96LB1 330 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 TOR3AQ9H497 397 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF304Q9HCX3 659 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF670-ZNF695F2Z2N8 137 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 TSPAN9O75954 239 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 NR2C1P13056 603 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 CDH11P55287 796 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 RAB8AP61006 207 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 SMU1Q2TAY7 513 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF613Q6PF04 617 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ARMC10Q8N2F6 343 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 CHCHD4Q8N4Q1 142 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 WDTC1Q8N5D0 677 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 ACSL5Q9ULC5 683 aa16■□□□□ 0.15
PCDHA1-203ENST00000504120 CRYBG1Q9Y4K1 1723 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 C9J4A7 227 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 ABCB7O75027 752 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 GALTP07902 379 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 PIM1P11309 404 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 WSCD2Q2TBF2 565 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 SFT2D3Q587I9 215 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 ATG9BQ674R7 924 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 PNLDC1Q8NA58 520 aaKnown RBP15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 IRF7Q92985 503 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 GAL3ST1Q99999 423 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 CLDND1Q9NY35 253 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 A8MUA0 341 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 CAPN5O15484 640 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 TLX2O43763 284 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 ALDOAP04075 364 aaKnown RBP15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 MPC1LP0DKB6 136 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 PREPP48147 710 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 AGTR2P50052 363 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 SLC9B2Q86UD5 537 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 RNF130Q86XS8 419 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 TMEM80Q96HE8 168 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 ADAM7Q9H2U9 754 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 SDHAF3Q9NRP4 125 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 NLGN3Q9NZ94 848 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 TMEM5Q9Y2B1 443 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 PLOD2O00469 737 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 PCDHGA12O60330 932 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 HOXB2P14652 356 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 KCNC4Q03721 635 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 PCBP2Q15366 365 aaKnown RBP eCLIP15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 Q6ZVL8 140 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF627Q7L945 461 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF548Q8NEK5 533 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 TMEM203Q969S6 136 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 MED11Q9P086 117 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 GIMAP2Q9UG22 337 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 OARD1Q9Y530 152 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 RLN2P04090 185 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 CHRM1P11229 460 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 FAM189A2Q15884 450 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 NANOGP8Q6NSW7 305 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 TMEM17Q86X19 198 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 TOMM5Q8N4H5 51 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 LRIG1Q96JA1 1093 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 TSSK6Q9BXA6 273 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 ACTL8Q9H568 366 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 NANOGQ9H9S0 305 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF224Q9NZL3 707 aa15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 TRPM3Q9HCF6 1732 aaPredicted RBP15.99■□□□□ 0.15
PCDHA1-203ENST00000504120 OR1I1O60431 355 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms