RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SLC26A7Q8TE54 656 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 METTL21AQ8WXB1 218 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 ZNF606Q8WXB4 792 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 SEPT1Q8WYJ6 367 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 DYRK2Q92630 601 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 P2RX5Q93086 422 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 SYAP1Q96A49 352 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 PRAC1Q96KF2 57 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 C4orf45Q96LM5 186 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 GDAP1L1Q96MZ0 367 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 NDNQ99608 321 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 ANP32EQ9BTT0 268 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 UTP14AQ9BVJ6 771 aaKnown RBP2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 CDK19Q9BWU1 502 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 KRT23Q9C075 422 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 SLC5A7Q9GZV3 580 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 SDCBP2Q9H190 292 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 ATP13A3Q9H7F0 1226 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 RNF121Q9H920 327 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 ZNF71Q9NQZ8 489 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 PHPT1Q9NRX4 125 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 ANO10Q9NW15 660 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 OR6C2Q9NZP2 312 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 SEPT10Q9P0V9 454 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 ACTR3BQ9P1U1 418 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 APPL1Q9UKG1 709 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 MAN1B1Q9UKM7 699 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 RUVBL2Q9Y230 463 aaKnown RBP2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 PIN4Q9Y237 131 aaKnown RBP2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 PPP2R2CQ9Y2T4 447 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 KIF3AQ9Y496 699 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 AGRNO00468 2067 aa2.16□□□□□ -2.06
HMGB1P35-201ENST00000503360 IGHV4-4A0A075B6R2 117 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRBV5-5A0A0J9YX44 114 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 OOEPA6NGQ2 149 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 YDJCA8MPS7 323 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 SNURFLB1AK76 121 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 C2CD4DB7Z1M9 353 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRSS46E5RG02 174 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 F8VVB4 439 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 F8VWA3 439 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC30A4O14863 429 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 BAG3O95817 575 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 MOCS2O96007 188 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 C9P02748 559 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 CFC1BP0CG36 223 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 CFC1P0CG37 223 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 F3P13726 295 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 GNB3P16520 340 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 SSTR1P30872 391 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 SFTPDP35247 375 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 TDO2P48775 406 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 KHKP50053 298 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 DNA2P51530 1060 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 YBEYP58557 167 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 GNB1P62873 340 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 ASIC1P78348 528 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 AKAP17AQ02040 695 aaKnown RBP2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 FOLH1Q04609 750 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 IL10RBQ08334 325 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 KLHL30Q0D2K2 578 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 NPRL3Q12980 569 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 OPCMLQ14982 345 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 EXT1Q16394 746 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 KBTBD12Q3ZCT8 623 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 ANKDD1AQ495B1 522 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 FUT11Q495W5 492 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 TTC27Q6P3X3 843 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 FUT10Q6P4F1 479 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF790Q6PG37 636 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 KDELC1Q6UW63 502 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 GBP6Q6ZN66 633 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 PPP1R42Q7Z4L9 355 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 PIGWQ7Z7B1 504 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 CROCCP3Q8IVE0 287 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 RCOR2Q8IZ40 523 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 LRTM2Q8N967 370 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 MRPL43Q8N983 215 aaKnown RBP2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC37A3Q8NCC5 494 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZBTB44Q8NCP5 570 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 DENND6BQ8NEG7 585 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 GPRC5AQ8NFJ5 357 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR1L3Q8NH93 324 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 NCOA7Q8NI08 942 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM190Q8WZ59 177 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 PIK3R3Q92569 461 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 ARHGAP45Q92619 1136 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 TEKT1Q969V4 418 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 LGALS12Q96DT0 336 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 SGF29Q96ES7 293 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 VPS39Q96JC1 886 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 KLHL5Q96PQ7 755 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 BTBD9Q96Q07 612 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRAM1Q96QH2 718 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 PIGQQ9BRB3 760 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 PITPNM3Q9BZ71 974 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 THAP2Q9H0W7 228 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 LIN28AQ9H9Z2 209 aaKnown RBP2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 TAS2R3Q9NYW6 316 aa2.15□□□□□ -2.07
HMGB1P35-201ENST00000503360 VPS18Q9P253 973 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms