RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 ZNF207O43670 478 aaKnown RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 HNRNPKP61978 463 aaKnown RBP eCLIP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 IKBKEQ14164 716 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 PARP15Q460N3 678 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ZNF404Q494X3 552 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 SV2AQ7L0J3 742 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 OR4K17Q8NGC6 315 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 OR10A6Q8NH74 314 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 GAB3Q8WWW8 586 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ENAMQ9NRM1 1142 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 TVP23BQ9NYZ1 205 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 FLRT1Q9NZU1 646 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 PNPP00491 289 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 PRNPP04156 253 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 BPGMP07738 259 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 NPBWR1P48145 328 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 PITPNBP48739 271 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ZNF143P52747 638 aaPredicted RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 IRF5Q13568 498 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 BPIFA2Q96DR5 249 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 OSGEPQ9NPF4 335 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 GRM6O15303 877 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 PROM1O43490 865 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 KLK3P07288 261 aaPredicted RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 DPEP1P16444 411 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 CHATP28329 748 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ACTR1BP42025 376 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ABCG1P45844 678 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 BTBD16Q32M84 506 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ATG9BQ674R7 924 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 SLC2A14Q8TDB8 520 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 THEM6Q8WUY1 208 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 MRI1Q9BV20 369 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ZNF436Q9C0F3 470 aaPredicted RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 POU2F3Q9UKI9 436 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 RNF215Q9Y6U7 377 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 DOCK8Q8NF50 2099 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 IRF6O14896 467 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 SCAMP1O15126 338 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 HNRNPLP14866 589 aaKnown RBP eCLIP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 KITLGP21583 273 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 UGT3A2Q3SY77 523 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 TMEM205Q6UW68 189 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 HAO2Q9NYQ3 351 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 APODP05090 189 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 TFPTP0C1Z6 253 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 CD6P30203 668 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ST3GAL3Q11203 375 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 SPIN4Q56A73 249 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 SLC39A4Q6P5W5 647 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 CARM1Q86X55 608 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 CACUL1Q86Y37 369 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 MMAAQ8IVH4 418 aaKnown RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 OR6N1Q8NGY5 312 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 MTMR9Q96QG7 549 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 KCNF1Q9H3M0 494 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 PATZ1Q9HBE1 687 aaKnown RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 PRELID3BQ9Y3B1 194 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 PCDHB3Q9Y5E6 796 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 M0R2N6 131 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 LEPRP48357 1165 aaKnown RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 SLC10A1Q14973 349 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 SLC36A3Q495N2 470 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 C16orf46Q6P387 395 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ISLR2Q6UXK2 745 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 MARCH9Q86YJ5 346 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 LSMEM2Q8N112 164 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 SVBPQ8N300 66 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 CLIP4Q8N3C7 705 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ZNF675Q8TD23 568 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 HAVCR2Q8TDQ0 301 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 CASD1Q96PB1 797 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 APMAPQ9HDC9 416 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 PRMT8Q9NR22 394 aaPredicted RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 DUSP22Q9NRW4 184 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 QPCTLQ9NXS2 382 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ZNF850A8MQ14 1090 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 SYNGR4O95473 234 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 H1F0P07305 194 aaKnown RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 NUDT17P0C025 328 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 HSPB3Q12988 150 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ATXN7L3Q14CW9 347 aaPredicted RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 NPTX1Q15818 432 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 MEDAGQ5VYS4 303 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 GALNT10Q86SR1 603 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 DPF2Q92785 391 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 MROQ9BYG7 248 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ITM2CQ9NQX7 267 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 ZNF701Q9NV72 531 aaPredicted RBP10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 TESMINQ9Y4I5 508 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 PCDHGA7Q9Y5G6 932 aa10.89□□□□□ -0.67
AC055713.1-201ENST00000498967 MC4RP32245 332 aa10.88□□□□□ -0.67
AC055713.1-201ENST00000498967 CCR8P51685 355 aa10.88□□□□□ -0.67
AC055713.1-201ENST00000498967 SP3Q02447 781 aa10.88□□□□□ -0.67
AC055713.1-201ENST00000498967 CRTC1Q6UUV9 634 aa10.88□□□□□ -0.67
AC055713.1-201ENST00000498967 DNAJC22Q8N4W6 341 aa10.88□□□□□ -0.67
AC055713.1-201ENST00000498967 LMLNQ96KR4 655 aa10.88□□□□□ -0.67
AC055713.1-201ENST00000498967 DGAT2Q96PD7 388 aa10.88□□□□□ -0.67
AC055713.1-201ENST00000498967 GLTPQ9NZD2 209 aa10.88□□□□□ -0.67
AC055713.1-201ENST00000498967 A0A1W2PS29 197 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms