RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	PDZK1P1	A8MUH7	402 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	TRIM49D1	C9J1S8	452 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	KIR2DS3	K7RE56	304 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	RASGRF2	O14827	1237 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	FFAR2	O15552	330 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CDH16	O75309	829 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	GPC4	O75487	556 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	SLCO2B1	O94956	709 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	LDOC1	O95751	146 aa	Predicted RBP	7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	EML2	O95834	649 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	SNRPA	P09012	282 aa	Known RBP	7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CBSL	P0DN79	551 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	SLC2A4	P14672	509 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	STMN1	P16949	149 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	PDHA2	P29803	388 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	ATP5D	P30049	168 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CBS	P35520	551 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CASR	P41180	1078 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	SERPINB8	P50452	374 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	PGGT1B	P53609	377 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	RAB10	P61026	200 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	UBE2I	P63279	158 aa	Known RBP	7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	SIM1	P81133	766 aa	Predicted RBP	7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	PLOD1	Q02809	727 aa	Predicted RBP	7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	TLE1	Q04724	770 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	ZNF844	Q08AG5	666 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CASP8	Q14790	479 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	KIR2DS5	Q14953	304 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	RASA2	Q15283	850 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	C14orf28	Q4W4Y0	310 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	ABRAXAS1	Q6UWZ7	409 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	RAPH1	Q70E73	1250 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CMC1	Q7Z7K0	106 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CPNE9	Q8IYJ1	553 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	SLC22A15	Q8IZD6	547 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	IQCK	Q8N0W5	287 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CNPY4	Q8N129	248 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	RIBC1	Q8N443	379 aa	Predicted RBP	7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	SFRP1	Q8N474	314 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	EID2	Q8N6I1	236 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	FAM46D	Q8NEK8	389 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	MDM1	Q8TC05	714 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	SETD7	Q8WTS6	366 aa	Known RBP	7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	MTBP	Q96DY7	904 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	ZIM3	Q96PE6	472 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	TMEM109	Q9BVC6	243 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	ROPN1B	Q9BZX4	212 aa	Predicted RBP	7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	TWSG1	Q9GZX9	223 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	WWP1	Q9H0M0	922 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	ZNF700	Q9H0M5	742 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	OR52A5	Q9H2C5	316 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	DPEP2	Q9H4A9	486 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	ROPN1	Q9HAT0	212 aa	Predicted RBP	7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	PRDM8	Q9NQV8	689 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	SNX15	Q9NRS6	342 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	TMEM140	Q9NV12	185 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	EURL	Q9NYK6	297 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CTNNAL1	Q9UBT7	734 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	TBK1	Q9UHD2	729 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	ACSL5	Q9ULC5	683 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	PSMD13	Q9UNM6	376 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	CDYL	Q9Y232	598 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	POLH	Q9Y253	713 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	WDR37	Q9Y2I8	494 aa		7.16	□□□□□ -1.26
GARNL3-222	ENST00000498801	TDRD6	O60522	2096 aa	Known RBP	7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	NCOR2	Q9Y618	2525 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	OR5K4	A6NMS3	321 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801		B4DGG1	531 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	EIF3F	O00303	357 aa	Predicted RBP	7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	IFRD1	O00458	451 aa	Predicted RBP	7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	NTN3	O00634	580 aa	Predicted RBP	7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	PHGDH	O43175	533 aa	Known RBP	7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	ALDOA	P04075	364 aa	Known RBP	7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	F3	P13726	295 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	ENO3	P13929	434 aa	Predicted RBP	7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	BRAF	P15056	766 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	ZNF37A	P17032	561 aa	Predicted RBP	7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	DDC	P20711	480 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	FPR1	P21462	350 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	CRABP2	P29373	138 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	TYK2	P29597	1187 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	HAL	P42357	657 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	MAGEA12	P43365	314 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	RGS4	P49798	205 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	RAB1A	P62820	205 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	DNAJC3	Q13217	504 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	KRT71	Q3SY84	523 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	ACSBG2	Q5FVE4	666 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	CEP85L	Q5SZL2	805 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	LRRC8E	Q6NSJ5	796 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	IYD	Q6PHW0	289 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	TMEM207	Q6UWW9	146 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	LRIG3	Q6UXM1	1119 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	PIWIL4	Q7Z3Z4	852 aa	Known RBP	7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	CROCCP2	Q86T23	111 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	VRK3	Q8IV63	474 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	NAGS	Q8N159	534 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	DCBLD1	Q8N8Z6	715 aa		7.15	□□□□□ -1.26
GARNL3-222	ENST00000498801	EEF1AKMT1	Q8WVE0	214 aa		7.15	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms