RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ATP13A2Q9NQ11 1180 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 C14orf105Q9NVL8 296 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 C3orf18Q9UK00 162 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 TP53TG5Q9Y2B4 290 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 CHD6Q8TD26 2715 aa12.14□□□□□ -0.47
HSPG2-213ENST00000498495 IQANK1A0A1B0GTG1 560 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 ANKDD1BA6NHY2 528 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 K7EPI3 171 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 SOCS6O14544 535 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 SERPINA6P08185 405 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 COL6A2P12110 1019 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 MTHFD2P13995 350 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 ALOX12P18054 663 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 HNF4AP41235 474 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 MAGEA12P43365 314 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 SNRPNP63162 240 aaKnown RBP12.13□□□□□ -0.47
HSPG2-213ENST00000498495 IRF8Q02556 426 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 CHIT1Q13231 466 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 LAPTM5Q13571 262 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 DOC2AQ14183 400 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 HIST2H2ACQ16777 129 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-213ENST00000498495 PFKFB4Q16877 469 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 PAGE2BQ5JRK9 111 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 HIST2H2AA3Q6FI13 130 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 NIPAL1Q6NVV3 410 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 KIRREL2Q6UWL6 708 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 ASB18Q6ZVZ8 466 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 ABHD13Q7L211 337 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 PRSS41Q7RTY9 318 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 LRRC70Q7Z2Q7 622 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 FDCSPQ8NFU4 85 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 TTLQ8NG68 377 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.13□□□□□ -0.47
HSPG2-213ENST00000498495 CCT6BQ92526 530 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 ISL2Q96A47 359 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 PTCD3Q96EY7 689 aaKnown RBP12.13□□□□□ -0.47
HSPG2-213ENST00000498495 SCYL1Q96KG9 808 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 GPR78Q96P69 363 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 PITHD1Q9GZP4 211 aaPredicted RBP12.13□□□□□ -0.47
HSPG2-213ENST00000498495 EHD1Q9H4M9 534 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 PRM3Q9NNZ6 103 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 ZNF358Q9NW07 568 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 OPTCQ9UBM4 332 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 NAALAD2Q9Y3Q0 740 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 ANGPTL3Q9Y5C1 460 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 PCDHGA9Q9Y5G4 932 aaKnown RBP12.13□□□□□ -0.47
HSPG2-213ENST00000498495 HS3ST3B1Q9Y662 390 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 CACNA1GO43497 2377 aa12.13□□□□□ -0.47
HSPG2-213ENST00000498495 IDSB3KWA1 339 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 K7EM74 188 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 KLHL41O60662 606 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 GALR3O60755 368 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-213ENST00000498495 CEACAM4O75871 244 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 KLHL18O94889 574 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 BMP10O95393 424 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 ZNF888P0CJ79 500 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-213ENST00000498495 MYBL2P10244 700 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 EPB42P16452 691 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 NR1D1P20393 614 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 GSTM2P28161 218 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 AGTR2P50052 363 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 PGDP52209 483 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 ALDH18A1P54886 795 aaKnown RBP12.12□□□□□ -0.47
HSPG2-213ENST00000498495 RAB8AP61006 207 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 STXBP1P61764 594 aaKnown RBP12.12□□□□□ -0.47
HSPG2-213ENST00000498495 AIMP2Q13155 320 aaKnown RBP12.12□□□□□ -0.47
HSPG2-213ENST00000498495 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 TUBB8Q3ZCM7 444 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 DEFB134Q4QY38 66 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 MFSD4BQ5TF39 518 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 FAAH2Q6GMR7 532 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 PDSS2Q86YH6 399 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 GALNT16Q8N428 558 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 TEX19Q8NA77 164 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 UTP15Q8TED0 518 aaKnown RBP12.12□□□□□ -0.47
HSPG2-213ENST00000498495 CREB3L4Q8TEY5 395 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 UBLCP1Q8WVY7 318 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-213ENST00000498495 METTL21AQ8WXB1 218 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 MTBPQ96DY7 904 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 SEC16BQ96JE7 1060 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 EFCAB11Q9BUY7 163 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 GPR83Q9NYM4 423 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 HCN3Q9P1Z3 774 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 CPSF2Q9P2I0 782 aaKnown RBP12.12□□□□□ -0.47
HSPG2-213ENST00000498495 FETUBQ9UGM5 382 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 MKL2Q9ULH7 1088 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 ASB1Q9Y576 335 aa12.12□□□□□ -0.47
HSPG2-213ENST00000498495 TNPO3Q9Y5L0 923 aaKnown RBP12.12□□□□□ -0.47
HSPG2-213ENST00000498495 ZFYVE26Q68DK2 2539 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 ZNF860A6NHJ4 632 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 ESPNB1AK53 854 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 MASP2O00187 686 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 KLK8O60259 260 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 PRAMEF4O60810 478 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 RDH16O75452 317 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 CLEC3AO75596 197 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 SLU7O95391 586 aaKnown RBP12.11□□□□□ -0.47
HSPG2-213ENST00000498495 SMIM10L1P0DMW3 83 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 ACPPP15309 386 aa12.11□□□□□ -0.47
HSPG2-213ENST00000498495 IL10P22301 178 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms