RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 PHF21AQ96BD5 680 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 SKA1Q96BD8 255 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 SNF8Q96H20 258 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 IFT74Q96LB3 600 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 CMTM3Q96MX0 182 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 TMEM237Q96Q45 408 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 CCDC77Q9BR77 488 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 AP1M1Q9BXS5 423 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 TMEM117Q9H0C3 514 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 THAP2Q9H0W7 228 aa4.54□□□□□ -1.68
SSR3-209ENST00000498205 MRPL47Q9HD33 250 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 INTS9Q9NV88 658 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 CORO1CQ9ULV4 474 aaPredicted RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 PACSIN2Q9UNF0 486 aaPredicted RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 R3HDM2Q9Y2K5 976 aaKnown RBP4.54□□□□□ -1.68
SSR3-209ENST00000498205 SIP14410 1827 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 LOC285556D6RIA3 1793 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 ADAMTSL1Q8N6G6 1762 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 ASTN2O75129 1339 aaPredicted RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 IGLV5-45A0A087WSX0 123 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 A0A1W2PP11 408 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 H0YIN7 160 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 K7ENM7 598 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 CLIC2O15247 247 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 OGG1O15527 345 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 ZNF189O75820 626 aaPredicted RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 PROSCO94903 275 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 SP1P08047 785 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 CCNB1P14635 433 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 EZRP15311 586 aaKnown RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 CSF2RAP15509 400 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 PAX1P15863 534 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 ACADLP28330 430 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 YWHABP31946 246 aaKnown RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 HPDP32754 393 aaPredicted RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 CDH5P33151 784 aaPredicted RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 RDXP35241 583 aaKnown RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 MNAT1P51948 309 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 PLTPP55058 493 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 CYP24A1Q07973 514 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 BNIP1Q12981 228 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 CDC16Q13042 620 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 GAGE2BQ13066 116 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 DMP1Q13316 513 aaPredicted RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 PSMD6Q15008 389 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 MORF4L2Q15014 288 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 TRADDQ15628 312 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 SNRNP35Q16560 246 aaKnown RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 GAGE2EQ4V326 116 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 RARS2Q5T160 578 aaKnown RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 FAM91A1Q658Y4 838 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 GAGE2AQ6NT46 116 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 GALNT5Q7Z7M9 940 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 CCDC190Q86UF4 302 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 MCOLN2Q8IZK6 566 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 NIPA2Q8N8Q9 360 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 CKAP2Q8WWK9 683 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 RBM41Q96IZ5 413 aaKnown RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 EGLN2Q96KS0 407 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 C12orf42Q96LP6 360 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 MAGEB18Q96M61 343 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 CCDC114Q96M63 670 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 CFAP57Q96MR6 1250 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 DUX3Q96PT4 197 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 TREX2Q9BQ50 279 aaPredicted RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 PIGMQ9H3S5 423 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 SLC38A10Q9HBR0 1119 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 LRRC4Q9HBW1 653 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 SLC40A1Q9NP59 571 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 UBE2TQ9NPD8 197 aaPredicted RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 PPANQ9NQ55 473 aaKnown RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 EIF2B3Q9NR50 452 aaKnown RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 ZFP57Q9NU63 452 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 RAB20Q9NX57 234 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 MARCH4Q9P2E8 410 aaPredicted RBP4.53□□□□□ -1.68
SSR3-209ENST00000498205 GAGE2DQ9UEU5 116 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 SLC24A2Q9UI40 661 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 ARL2BPQ9Y2Y0 163 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 PARP14Q460N5 1801 aa4.53□□□□□ -1.68
SSR3-209ENST00000498205 ZNFX1Q9P2E3 1918 aaKnown RBP4.52□□□□□ -1.69
SSR3-209ENST00000498205 ARID2Q68CP9 1835 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 CDRT15L2A8MXV6 281 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 ZNF487B1APH4 448 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 DNM1LO00429 736 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 SPOPO43791 374 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 EXTL3O43909 919 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 SPAG6O75602 509 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 TOMM70O94826 608 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 IGHV4-39P01824 125 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 CALB1P05937 261 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 PRSS1P07477 247 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 TRIM49P0CI25 452 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 TRIM49CP0CI26 452 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 GM2AP17900 193 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 ANXA7P20073 488 aaKnown RBP4.52□□□□□ -1.69
SSR3-209ENST00000498205 MARK3P27448 753 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 ADSSP30520 456 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 MAP2K2P36507 400 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 CDKN1AP38936 164 aa4.52□□□□□ -1.69
SSR3-209ENST00000498205 RXRGP48443 463 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms