RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CSHL1Q14406 222 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 MORF4L2Q15014 288 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 ABRAXAS2Q15018 415 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 NSDHLQ15738 373 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 MSS51Q4VC12 460 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 TEDDM1Q5T9Z0 273 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 TMEM207Q6UWW9 146 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 SYDE1Q6ZW31 735 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 IGDCC3Q8IVU1 814 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 OR56A3Q8NH54 315 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 M1APQ8TC57 530 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 PYCR2Q96C36 320 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 FBXL8Q96CD0 374 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 LRRC39Q96DD0 335 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 CFAP36Q96G28 342 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 SNF8Q96H20 258 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 PEX11GQ96HA9 241 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 RUNDC3BQ96NL0 473 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 LPAR4Q99677 370 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 VWA7Q9Y334 891 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 DIDO1Q9BTC0 2240 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 SCN2AQ99250 2005 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 CACNA1DQ01668 2161 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 TRBC2A0A5B9 178 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 OR2W5A6NFC9 320 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 MAGEB17A8MXT2 336 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 ZG16O60844 167 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 CDC123O75794 336 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 UNC5CO95185 931 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 GUCA1CO95843 209 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 TSPAN12O95859 305 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 JAK1P23458 1154 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 ELK3P41970 407 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 TAS2R50P59544 299 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 MEF2AQ02078 507 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 RBPJQ06330 500 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 MEP1AQ16819 746 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.08□□□□□ -0.642e-6■■■□□ 16.2
NUDCD3-211ENST00000497978 SFT2D3Q587I9 215 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 ZNF766Q5HY98 468 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 ACER2Q5QJU3 275 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 HP1BP3Q5SSJ5 553 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 C1QL3Q5VWW1 255 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 H3F3CQ6NXT2 135 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 PAPD4Q6PIY7 484 aaKnown RBP11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 ABHD13Q7L211 337 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 STRA8Q7Z7C7 330 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 PDSS2Q86YH6 399 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 BEST3Q8N1M1 668 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 SLC5A8Q8N695 610 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 PLPP5Q8NEB5 264 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 OR4K1Q8NGD4 311 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 RELTQ969Z4 430 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 SARGQ9BW04 601 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 RBCK1Q9BYM8 510 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 MMP25Q9NPA2 562 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 TRMT1Q9NXH9 659 aaKnown RBP11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 SUCOQ9UBS9 1254 aaKnown RBP11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 SEC14L3Q9UDX4 400 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 CHMP2BQ9UQN3 213 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 DYRK1BQ9Y463 629 aa11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 UTP20O75691 2785 aaKnown RBP11.08□□□□□ -0.64
NUDCD3-211ENST00000497978 TRGV8A0A0C4DH27 118 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 URADA6NGE7 173 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 ZNF860A6NHJ4 632 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 TTI1O43156 1089 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 GALR3O60755 368 aaPredicted RBP11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 MLYCDO95822 493 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 FHP07954 510 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 ALOX12P18054 663 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 IVDP26440 423 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 AHRP35869 848 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 CASP6P55212 293 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 ARL4CP56559 192 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 OR4D2P58180 307 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 DR1Q01658 176 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 RHAGQ02094 409 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 DEFB134Q4QY38 66 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 FCRLBQ6BAA4 426 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 MTFR2Q6P444 385 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 KLHL7Q8IXQ5 586 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 AFAP1L2Q8N4X5 818 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 HORMAD2Q8N7B1 307 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 ZNF740Q8NDX6 193 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 NT5CQ8TCD5 201 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 SLC5A11Q8WWX8 675 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 NEIL2Q969S2 332 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 TBC1D20Q96BZ9 403 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 PDLIM5Q96HC4 596 aaKnown RBP11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 OR4K3Q96R72 315 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 AIF1LQ9BQI0 150 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 UTP23Q9BRU9 249 aaKnown RBP11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 ZFATQ9P243 1243 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 SLC17A6Q9P2U8 582 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 COPG2Q9UBF2 871 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 ZFP69BQ9UJL9 534 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 PCDHGB6Q9Y5F9 930 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 NOTCH2Q04721 2471 aa11.07□□□□□ -0.64
NUDCD3-211ENST00000497978 CROCCQ5TZA2 2017 aa11.06□□□□□ -0.64
NUDCD3-211ENST00000497978 HNRNPRO43390 633 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms