RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 MTERF1Q99551 399 aaKnown RBP13.58□□□□□ -0.24
VPS26A-209ENST00000497564 SERPINI1Q99574 410 aa13.58□□□□□ -0.24
VPS26A-209ENST00000497564 SLC38A3Q99624 504 aa13.58□□□□□ -0.24
VPS26A-209ENST00000497564 RAB33BQ9H082 229 aa13.58□□□□□ -0.24
VPS26A-209ENST00000497564 ZIM2Q9NZV7 527 aa13.58□□□□□ -0.24
VPS26A-209ENST00000497564 POMT2Q9UKY4 750 aa13.58□□□□□ -0.24
VPS26A-209ENST00000497564 EIF3LQ9Y262 564 aaKnown RBP13.58□□□□□ -0.24
VPS26A-209ENST00000497564 MSRB2Q9Y3D2 182 aa13.58□□□□□ -0.24
VPS26A-209ENST00000497564 U3KQA8 63 aa13.58□□□□□ -0.24
VPS26A-209ENST00000497564 ANKDD1BA6NHY2 528 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 PSMD12O00232 456 aaPredicted RBP13.57□□□□□ -0.24
VPS26A-209ENST00000497564 SEC22BO75396 215 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 CLEC3AO75596 197 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 SEMA3DO95025 777 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 ETHE1O95571 254 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 PROS1P07225 676 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 EZRP15311 586 aaKnown RBP13.57□□□□□ -0.24
VPS26A-209ENST00000497564 AMD1P17707 334 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 CALB2P22676 271 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 PTX3P26022 381 aaPredicted RBP13.57□□□□□ -0.24
VPS26A-209ENST00000497564 MAPK1P28482 360 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 DIO3P55073 304 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 RPL38P63173 70 aaKnown RBP13.57□□□□□ -0.24
VPS26A-209ENST00000497564 BIRC2Q13490 618 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 CUL3Q13618 768 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 DDX39BQ13838 428 aaKnown RBP13.57□□□□□ -0.24
VPS26A-209ENST00000497564 RBBP5Q15291 538 aaKnown RBP13.57□□□□□ -0.24
VPS26A-209ENST00000497564 SPRED3Q2MJR0 410 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 SPIN4Q56A73 249 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 ZNF761Q86XN6 746 aaPredicted RBP13.57□□□□□ -0.24
VPS26A-209ENST00000497564 FAM9CQ8IZT9 166 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 MIER2Q8N344 545 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 RNF175Q8N4F7 328 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 RSC1A1Q92681 617 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 CMTM5Q96DZ9 223 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 MS4A8Q9BY19 250 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 EPHA6Q9UF33 1036 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 TAGLN3Q9UI15 199 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 G3BP2Q9UN86 482 aaKnown RBP13.57□□□□□ -0.24
VPS26A-209ENST00000497564 RUVBL1Q9Y265 456 aaKnown RBP13.57□□□□□ -0.24
VPS26A-209ENST00000497564 PCDHGA4Q9Y5G9 962 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 RNF215Q9Y6U7 377 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 PKD1L2Q7Z442 2459 aa13.57□□□□□ -0.24
VPS26A-209ENST00000497564 RHPN2P1A8MT19 583 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 HAT1O14929 419 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 OR1F1O43749 312 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 LCMT2O60294 686 aaKnown RBP13.56□□□□□ -0.24
VPS26A-209ENST00000497564 CBX6O95503 412 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 TBX6O95947 436 aaPredicted RBP13.56□□□□□ -0.24
VPS26A-209ENST00000497564 PRPS2P11908 318 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 COX4I1P13073 169 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 PNLIPP16233 465 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 ARFIP1P53367 373 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 RPS15AP62244 130 aaKnown RBP13.56□□□□□ -0.24
VPS26A-209ENST00000497564 TBL3Q12788 808 aaKnown RBP13.56□□□□□ -0.24
VPS26A-209ENST00000497564 MAPRE2Q15555 327 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 CACHD1Q5VU97 1274 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 IL23RQ5VWK5 629 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 FCRL6Q6DN72 434 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 ARMC6Q6NXE6 501 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 GALNT18Q6P9A2 607 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 FIGLAQ6QHK4 219 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 TMPRSS7Q7RTY8 843 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 ADCK2Q7Z695 626 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 FAM20CQ8IXL6 584 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 MFSD9Q8NBP5 474 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 TRPV3Q8NET8 790 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 RP9Q8TA86 221 aaKnown RBP13.56□□□□□ -0.24
VPS26A-209ENST00000497564 TSPEARQ8WU66 669 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 CHTF18Q8WVB6 975 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 THAP11Q96EK4 314 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 APIPQ96GX9 242 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 APOLD1Q96LR9 279 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 C1orf50Q9BV19 199 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 ABCG4Q9H172 646 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 SEMA6CQ9H3T2 930 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 LRIT1Q9P2V4 623 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 POLR3HQ9Y535 204 aaPredicted RBP13.56□□□□□ -0.24
VPS26A-209ENST00000497564 AP1M2Q9Y6Q5 423 aa13.56□□□□□ -0.24
VPS26A-209ENST00000497564 CHD6Q8TD26 2715 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 ACACAQ13085 2346 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 FEZF1A0PJY2 475 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 ANKRD28O15084 1053 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 CASC3O15234 703 aaKnown RBP13.55□□□□□ -0.24
VPS26A-209ENST00000497564 ZW10O43264 779 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 RFPL3O75679 317 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 THRAP10827 490 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 ESRRAP11474 423 aaPredicted RBP13.55□□□□□ -0.24
VPS26A-209ENST00000497564 BCKDHAP12694 445 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 CKMT2P17540 419 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 TYRP1P17643 537 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 MAGP20916 626 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 JAK1P23458 1154 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 BCL6P41182 706 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 LSSP48449 732 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 MNAT1P51948 309 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 NCALDP61601 193 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 GPLD1P80108 840 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 ACSM2AQ08AH3 577 aa13.55□□□□□ -0.24
VPS26A-209ENST00000497564 RPS6KA2Q15349 733 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms