RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 INPPL1O15357 1258 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 LRRTM2O43300 516 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 FAM20BO75063 409 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 RPS6KA5O75582 802 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 OR4F21O95013 312 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 AGTP01019 485 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 STAG3L3P0CL85 134 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 SMIM18P0DKX4 95 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 HAPLN1P10915 354 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 CEBPBP17676 345 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 NCF2P19878 526 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 PPP2R1AP30153 589 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 PRDX2P32119 198 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 CA8P35219 290 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 TNFRSF4P43489 277 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 CCL11P51671 97 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 SLURP1P55000 103 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 SOX10P56693 466 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 CARD18P57730 90 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 CD81P60033 236 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 CNTN2Q02246 1040 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 IL10RBQ08334 325 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 MSLNQ13421 630 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 BCL7AQ4VC05 210 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 DCAF6Q58WW2 860 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 FBXO48Q5FWF7 155 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 TMEM71Q6P5X7 295 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 TMCO2Q7Z6W1 182 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 PEG10Q86TG7 708 aaKnown RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 SLC5A8Q8N695 610 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 PCDH20Q8N6Y1 951 aaKnown RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 SLC26A7Q8TE54 656 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 SLC25A43Q8WUT9 341 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 NCLNQ969V3 563 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 MTERF3Q96E29 417 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 OXNAD1Q96HP4 312 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 Q96MF0 132 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 ZNF48Q96MX3 618 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 TSSK2Q96PF2 358 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 B3GNT4Q9C0J1 378 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 FAM192AQ9GZU8 254 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 PNNQ9H307 717 aaKnown RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 XKR8Q9H6D3 395 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 GSN-AS1Q9NRJ2 163 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 PHPT1Q9NRX4 125 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 MIS18AQ9NYP9 233 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 KIAA1257Q9ULG3 409 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 KCTD3Q9Y597 815 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.72□□□□□ -1.49
BRCA1-224ENST00000497488 SPATA31E1Q6ZUB1 1445 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 SETBP1Q9Y6X0 1596 aa5.72□□□□□ -1.49
BRCA1-224ENST00000497488 MBLAC1A4D2B0 266 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-224ENST00000497488 CASTOR2A6NHX0 329 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 OR52A4PA6NMU1 304 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 C4orf47A7E2U8 309 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 ETV2O00321 342 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-224ENST00000497488 PDXKO00764 312 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 ECE2O60344 883 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 EGR2P11161 476 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-224ENST00000497488 CYP3A5P20815 502 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 COMTP21964 271 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 NR4A1P22736 598 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 CHI3L1P36222 383 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-224ENST00000497488 NR2C2P49116 596 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 RGS4P49798 205 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 CTSCP53634 463 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 HADHBP55084 474 aaKnown RBP5.71□□□□□ -1.5
BRCA1-224ENST00000497488 TAS2R38P59533 333 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 EIF3EP60228 445 aaKnown RBP5.71□□□□□ -1.5
BRCA1-224ENST00000497488 FKBP1BP68106 108 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 CBX1P83916 185 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 HOXA4Q00056 320 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-224ENST00000497488 MYBPC1Q00872 1141 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 SPAG1Q07617 926 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 SMTNL2Q2TAL5 461 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 MIIPQ5JXC2 388 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 RABGAP1LQ5R372 815 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 AKNAD1Q5T1N1 836 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 GRTP1Q5TC63 336 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 C18orf63Q68DL7 685 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 LRRC8BQ6P9F7 803 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 SLC29A4Q7RTT9 530 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 ZDHHC17Q8IUH5 632 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 FAM114A1Q8IWE2 563 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 DSELQ8IZU8 1212 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 DCLK2Q8N568 766 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 LRRC17Q8N6Y2 441 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 TEX45Q8NA69 505 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 OR8K3Q8NH51 312 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 RAB3IL1Q8TBN0 382 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 STARD8Q92502 1023 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 OSTF1Q92882 214 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 RFT1Q96AA3 541 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 DHX58Q96C10 678 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 PGM2Q96G03 612 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 FAM89AQ96GI7 184 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 LRR1Q96L50 414 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 SEMA6AQ9H2E6 1030 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 Q9H8V8 135 aa5.71□□□□□ -1.5
BRCA1-224ENST00000497488 CALHM2Q9HA72 323 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms