RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	OR11G2	Q8NGC1	345 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	FKBP10	Q96AY3	582 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	FAM136A	Q96C01	138 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	CCDC138	Q96M89	665 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	DHRS4	Q9BTZ2	278 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	VPS37B	Q9H9H4	285 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	FANCE	Q9HB96	536 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	MRM3	Q9HC36	420 aa	Known RBP	5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	GPR83	Q9NYM4	423 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	PAK5	Q9P286	719 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	PLEKHB1	Q9UF11	243 aa	Predicted RBP	5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	IKZF3	Q9UKT9	509 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	TTC7A	Q9ULT0	858 aa	Predicted RBP	5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	GUCA1B	Q9UMX6	200 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	PLCL2	Q9UPR0	1127 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	CACNA1C	Q13936	2221 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	DIDO1	Q9BTC0	2240 aa	Known RBP	5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	EXPH5	Q8NEV8	1989 aa		5.24	□□□□□ -1.57
UBE3C-208	ENST00000497368	NCKAP5	O14513	1909 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	CNTRL	Q7Z7A1	2325 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368		A1L4Q6	167 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	C7orf72	A4D263	438 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	GOLGA6L9	A6NEM1	432 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	C4orf51	C9J302	202 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	PSMD3	O43242	534 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	FOXS1	O43638	330 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	PSIP1	O75475	530 aa	Known RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	KLHL18	O94889	574 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	TSPAN12	O95859	305 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	FGG	P02679	453 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	STATH	P02808	62 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	KLK3	P07288	261 aa	Predicted RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	MMP11	P24347	488 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	GABRB3	P28472	473 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	ATP5D	P30049	168 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	CXCR5	P32302	372 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	FOLR3	P41439	243 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	SLC1A2	P43004	574 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	TNNT3	P45378	269 aa	Predicted RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	NAP1L1	P55209	391 aa	Known RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	EIF3B	P55884	814 aa	Known RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	VSX2	P58304	361 aa	Predicted RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	DCD	P81605	110 aa	Known RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	PRR5	P85299	388 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	MPP1	Q00013	466 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	CUL1	Q13616	776 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	KRT33B	Q14525	404 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	PCOLCE	Q15113	449 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	TRIP13	Q15645	432 aa	Predicted RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	CCNG2	Q16589	344 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	FXN	Q16595	210 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	CYP1B1	Q16678	543 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	SYT16	Q17RD7	645 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	HKDC1	Q2TB90	917 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	EIF2S3L	Q2VIR3	472 aa	Known RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	PCID2	Q5JVF3	399 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	SEL1L2	Q5TEA6	688 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	ZNF324B	Q6AW86	544 aa	Predicted RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	FBXO42	Q6P3S6	717 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	LRRC8B	Q6P9F7	803 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	SUSD1	Q6UWL2	747 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	PPP1R21	Q6ZMI0	780 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	CYHR1	Q6ZMK1	362 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	MBOAT1	Q6ZNC8	495 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	TTLL10	Q6ZVT0	673 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	OVCH1	Q7RTY7	1134 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	LINC00523	Q86TU6	105 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	ZNF227	Q86WZ6	799 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	RAB43	Q86YS6	212 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	PLD3	Q8IV08	490 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	RASGEF1C	Q8N431	466 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	RNF10	Q8N5U6	811 aa	Known RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	CELF2-AS1	Q8N7Q2	184 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	DNAAF3	Q8N9W5	541 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	PPHLN1	Q8NEY8	458 aa	Known RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	CFAP61	Q8NHU2	1237 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	CD200R1	Q8TD46	325 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	ZNF480	Q8WV37	535 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	SEC14L1	Q92503	715 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	C8orf44	Q96CB5	159 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	MS4A14	Q96JA4	679 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	SERPINB12	Q96P63	405 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	TAAR6	Q96RI8	345 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	PKP4	Q99569	1192 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	NPAS2	Q99743	824 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	WDR77	Q9BQA1	342 aa	Predicted RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	AICDA	Q9GZX7	198 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	SPNS1	Q9H2V7	528 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	WDR54	Q9H977	334 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	LUC7L	Q9NQ29	371 aa	Known RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	CUTC	Q9NTM9	273 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	IFT80	Q9P2H3	777 aa	Predicted RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	POLG2	Q9UHN1	485 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	SRPK3	Q9UPE1	567 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	ZNF148	Q9UQR1	794 aa		5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	RUVBL1	Q9Y265	456 aa	Known RBP	5.23	□□□□□ -1.57
UBE3C-208	ENST00000497368	DRG1	Q9Y295	367 aa	Known RBP	5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms