RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ZNF770Q6IQ21 691 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC25A24Q6NUK1 477 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 DLEU7Q6UYE1 221 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 NAPRTQ6XQN6 538 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 IL17RELQ6ZVW7 336 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM57BQ71RH2 274 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 GPR180Q86V85 440 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 NUDT13Q86X67 352 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 PRIMA1Q86XR5 153 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM219AQ8IW50 185 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 KLHL7Q8IXQ5 586 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 RASGEF1AQ8N9B8 481 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 C8orf58Q8NAV2 365 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SYT8Q8NBV8 401 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 CSNK2A3Q8NEV1 391 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC24A4Q8NFF2 622 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 NCOA7Q8NI08 942 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 ACTRT2Q8TDY3 377 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 CKAP2Q8WWK9 683 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 DHX58Q96C10 678 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 RHBDF1Q96CC6 855 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 NXNL1Q96CM4 212 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SGF29Q96ES7 293 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 DTNBP1Q96EV8 351 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 UROC1Q96N76 676 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF570Q96NI8 536 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 PANX3Q96QZ0 392 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TESK2Q96S53 571 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 DDOQ99489 341 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SLC38A3Q99624 504 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 WDR77Q9BQA1 342 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TRMOQ9BU70 441 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 NPFFR1Q9GZQ6 430 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 ATG10Q9H0Y0 220 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TFB2MQ9H5Q4 396 aaKnown RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 MMRN2Q9H8L6 949 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 MINDY3Q9H8M7 445 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 Q9H8V8 135 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 CLK4Q9HAZ1 481 aaKnown RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 CDH20Q9HBT6 801 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 PCDH9Q9HC56 1237 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SYTL2Q9HCH5 934 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 CHMP1AQ9HD42 196 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 DNAJC4Q9NNZ3 241 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 KCNMB3Q9NPA1 279 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 MRPL17Q9NRX2 175 aaKnown RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 GPR173Q9NS66 373 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM118AQ9NWS6 357 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 DPP3Q9NY33 737 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 CISD1Q9NZ45 108 aaKnown RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 OR6C3Q9NZP0 311 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 SPASTQ9UBP0 616 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TESQ9UGI8 421 aaKnown RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 RABL2BQ9UNT1 228 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 KIF3AQ9Y496 699 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TCAF1Q9Y4C2 921 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 MN1Q10571 1320 aaPredicted RBP2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 TENM3Q9P273 2699 aa2.33□□□□□ -2.04
CKS1BP2-201ENST00000497342 BAZ2BQ9UIF8 2168 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 A0A0A6YYC8 382 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 TRAV24A0A0B4J272 114 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 FAM230AA0A1W2PPH8 454 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SMIM30A4D0T7 59 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 F8W810 466 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 I3L1I5 382 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 J3QR06 171 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 RHODO00212 210 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CACNB4O00305 520 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SPINT2O43291 252 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 AP5Z1O43299 807 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 PLPP2O43688 288 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 RNASEH1O60930 286 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 NME6O75414 186 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZNF821O75541 412 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 RAD51DO75771 328 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ATP6AP2O75787 350 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ZWINTO95229 277 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CH25HO95992 272 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 LCATP04180 440 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 PCCAP05165 728 aaPredicted RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ASNSP08243 561 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 RNF224P0DH78 156 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SKILP12757 684 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CYP3A5P20815 502 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 FCARP24071 287 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 MPZP25189 248 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 RPA1P27694 616 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SFNP31947 248 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 HSD17B3P37058 310 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 MAGEA4P43358 317 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ALDH7A1P49419 539 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 SERPINH1P50454 418 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CTSWP56202 376 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 NME5P56597 212 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 TMPRSS3P57727 454 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 POLR2FP61218 127 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 PMP22Q01453 160 aa2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 CRYZQ08257 329 aaKnown RBP2.32□□□□□ -2.04
CKS1BP2-201ENST00000497342 ITGADQ13349 1161 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms