RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ARHGAP45Q92619 1136 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 CCDC47Q96A33 483 aaKnown RBP3.56□□□□□ -1.84
SMC4-225ENST00000497203 C5orf30Q96GV9 206 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 PANX3Q96QZ0 392 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 F2RL3Q96RI0 385 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 PRMT1Q99873 361 aaKnown RBP3.56□□□□□ -1.84
SMC4-225ENST00000497203 P2RY12Q9H244 342 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 RAB9BQ9NP90 201 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 PNPLA3Q9NST1 481 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 PANK4Q9NVE7 773 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 INTS10Q9NVR2 710 aaKnown RBP3.56□□□□□ -1.84
SMC4-225ENST00000497203 EPHA6Q9UF33 1036 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 MAD2L2Q9UI95 211 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 NSG2Q9Y328 171 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 PCDHGA1Q9Y5H4 931 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 SELENOKQ9Y6D0 94 aa3.56□□□□□ -1.84
SMC4-225ENST00000497203 A0A087X0K7 114 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 SMIM30A4D0T7 59 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 ANTXRLA6NF34 631 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 ANKDD1BA6NHY2 528 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 MSGN1A6NI15 193 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 A8MVM7 634 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 SNURFLB1AK76 121 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 SOCS5O75159 536 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 NME6O75414 186 aaPredicted RBP3.55□□□□□ -1.84
SMC4-225ENST00000497203 AKAP3O75969 853 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 LETM1O95202 739 aaPredicted RBP3.55□□□□□ -1.84
SMC4-225ENST00000497203 SBK2P0C263 348 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 RPL35AP18077 110 aaKnown RBP3.55□□□□□ -1.84
SMC4-225ENST00000497203 AADACP22760 399 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 DUTP33316 252 aaKnown RBP3.55□□□□□ -1.84
SMC4-225ENST00000497203 MAGEB1P43366 347 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 SERPINH1P50454 418 aaKnown RBP3.55□□□□□ -1.84
SMC4-225ENST00000497203 DCDC1P59894 354 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 SLC3A1Q07837 685 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 AP1B1Q10567 949 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 CBX3Q13185 183 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 SRSF9Q13242 221 aaKnown RBP eCLIP3.55□□□□□ -1.84
SMC4-225ENST00000497203 MAPK11Q15759 364 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 STXBP2Q15833 593 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 SGCBQ16585 318 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 OTUD3Q5T2D3 398 aaPredicted RBP3.55□□□□□ -1.84
SMC4-225ENST00000497203 SLC25A47Q6Q0C1 308 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 LEKR1Q6ZMV7 388 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 COX8CQ7Z4L0 72 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 RAB42Q8N4Z0 105 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 NAT8LQ8N9F0 302 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 GATAD1Q8WUU5 269 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 ATP6V0BQ99437 205 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 ZNF559Q9BR84 538 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 FUCA2Q9BTY2 467 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 TDRD1Q9BXT4 1180 aaKnown RBP3.55□□□□□ -1.84
SMC4-225ENST00000497203 DPEP2Q9H4A9 486 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 EGLN3Q9H6Z9 239 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 ATP13A3Q9H7F0 1226 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 ZNF71Q9NQZ8 489 aaPredicted RBP3.55□□□□□ -1.84
SMC4-225ENST00000497203 MRPL17Q9NRX2 175 aaKnown RBP3.55□□□□□ -1.84
SMC4-225ENST00000497203 MAN2C1Q9NTJ4 1040 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 TMOD3Q9NYL9 352 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 PILRBQ9UKJ0 227 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 NCKAP1Q9Y2A7 1128 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 PPP2R2CQ9Y2T4 447 aa3.55□□□□□ -1.84
SMC4-225ENST00000497203 A0A087WW49 117 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 A0A0A6YYC8 382 aaPredicted RBP3.54□□□□□ -1.84
SMC4-225ENST00000497203 MAGEB16A2A368 324 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 H3BMM5 538 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 I3L1I5 382 aaPredicted RBP3.54□□□□□ -1.84
SMC4-225ENST00000497203 M0R296 226 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 KIF5CO60282 957 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 CYTIPO60759 359 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 CLN5O75503 358 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 KHDRBS3O75525 346 aaKnown RBP3.54□□□□□ -1.84
SMC4-225ENST00000497203 PRDM1O75626 825 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 OLFM2O95897 454 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 CEACAM1P13688 526 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 CPA3P15088 417 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 GOT1P17174 413 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 MAP2K2P36507 400 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 ZNF876PQ49A33 203 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 FFAR4Q5NUL3 377 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 PRAMEF8Q5VWM4 474 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 KCTD11Q693B1 232 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 FAM53AQ6NSI3 398 aaPredicted RBP3.54□□□□□ -1.84
SMC4-225ENST00000497203 DHRS11Q6UWP2 260 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 C15orf52Q6ZUT6 534 aaKnown RBP3.54□□□□□ -1.84
SMC4-225ENST00000497203 PRSS42Q7Z5A4 293 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 TMEM126BQ8IUX1 230 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 CCDC185Q8N715 623 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 RNF149Q8NC42 400 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 OR5T2Q8NGG2 359 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 OR4D10Q8NGI6 311 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 ST7LQ8TDW4 575 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 TMEM190Q8WZ59 177 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 SNX21Q969T3 373 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 LGALS12Q96DT0 336 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 FBXO17Q96EF6 278 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 MAGED4Q96JG8 741 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 DUX3Q96PT4 197 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 GAL3ST4Q96RP7 486 aa3.54□□□□□ -1.84
SMC4-225ENST00000497203 OSBPL8Q9BZF1 889 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms