RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 ENTPD3O75355 529 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 GJB3O75712 270 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 TRUB2O95900 331 aaKnown RBP4.41□□□□□ -1.7
MDM2-220ENST00000496959 IGHV2-70P01814 119 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 IGHEP01854 428 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 PRKAR1AP10644 381 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 HAPLN1P10915 354 aaPredicted RBP4.41□□□□□ -1.7
MDM2-220ENST00000496959 PFKFB1P16118 471 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 RPS12P25398 132 aaKnown RBP4.41□□□□□ -1.7
MDM2-220ENST00000496959 MTHFRP42898 656 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 FKBP1BP68106 108 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 KLC1Q07866 573 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 CUL4AQ13619 759 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 BAATQ14032 418 aaPredicted RBP4.41□□□□□ -1.7
MDM2-220ENST00000496959 EFTUD2Q15029 972 aaKnown RBP eCLIP4.41□□□□□ -1.72e-6■■■□□ 15.5
MDM2-220ENST00000496959 ZNF74Q16587 644 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 HSP90AB3PQ58FF7 597 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 ZNF595Q8IYB9 648 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 PRICKLE1Q96MT3 831 aaPredicted RBP4.41□□□□□ -1.7
MDM2-220ENST00000496959 PNNQ9H307 717 aaKnown RBP4.41□□□□□ -1.7
MDM2-220ENST00000496959 MRPL15Q9P015 296 aaKnown RBP4.41□□□□□ -1.7
MDM2-220ENST00000496959 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.41□□□□□ -1.7
MDM2-220ENST00000496959 TMEM5Q9Y2B1 443 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 CSNK1G3Q9Y6M4 447 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 MAP3K15Q6ZN16 1313 aa4.41□□□□□ -1.7
MDM2-220ENST00000496959 LAMB1P07942 1786 aa4.4□□□□□ -1.7
MDM2-220ENST00000496959 ZNF609O15014 1411 aa4.4□□□□□ -1.7
MDM2-220ENST00000496959 H0YAE9 185 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 ARPC2O15144 300 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 BBOX1O75936 387 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 HSPA5P11021 654 aaKnown RBP4.4□□□□□ -1.71
MDM2-220ENST00000496959 CAPN2P17655 700 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 EPS15P42566 896 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 CSNK2BP67870 215 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 PHKG1Q16816 387 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 MFSD12Q6NUT3 480 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 NOTUMQ6P988 496 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 LINC00346Q8IVM7 164 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 LGI2Q8N0V4 545 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 ATL1Q8WXF7 558 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 PTERQ96BW5 349 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 NXNL1Q96CM4 212 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 AGAP4Q96P64 663 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 SPAG5Q96R06 1193 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 GAL3ST4Q96RP7 486 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.4□□□□□ -1.71
MDM2-220ENST00000496959 TMED3Q9Y3Q3 217 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 ATP6V0A2Q9Y487 856 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 ABCC12Q96J65 1359 aa4.4□□□□□ -1.71
MDM2-220ENST00000496959 COL4A5P29400 1685 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 ASB14A6NK59 587 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 A8MV72 311 aaPredicted RBP4.39□□□□□ -1.71
MDM2-220ENST00000496959 PRKAR2BP31323 418 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 EIF2DP41214 584 aaKnown RBP4.39□□□□□ -1.71
MDM2-220ENST00000496959 GMPSP49915 693 aaPredicted RBP4.39□□□□□ -1.71
MDM2-220ENST00000496959 ALDH3A2P51648 485 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 PSMC6P62333 389 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 UBXN2AP68543 259 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 PAX8Q06710 450 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 TAF7Q15545 349 aaPredicted RBP4.39□□□□□ -1.71
MDM2-220ENST00000496959 MEA1Q16626 185 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 CST9Q5W186 159 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 TSPAN14Q8NG11 270 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 DCPSQ96C86 337 aaKnown RBP4.39□□□□□ -1.71
MDM2-220ENST00000496959 EVI5LQ96CN4 794 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 TMCO6Q96DC7 493 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 UTP14AQ9BVJ6 771 aaKnown RBP4.39□□□□□ -1.71
MDM2-220ENST00000496959 FAM120CQ9NX05 1096 aaKnown RBP4.39□□□□□ -1.71
MDM2-220ENST00000496959 NDE1Q9NXR1 346 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 GDE1Q9NZC3 331 aa4.39□□□□□ -1.71
MDM2-220ENST00000496959 CRNNQ9UBG3 495 aaPredicted RBP4.39□□□□□ -1.71
MDM2-220ENST00000496959 DDX25Q9UHL0 483 aaKnown RBP4.39□□□□□ -1.71
MDM2-220ENST00000496959 PPIEQ9UNP9 301 aaKnown RBP4.39□□□□□ -1.71
MDM2-220ENST00000496959 MYH3P11055 1940 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 ECM29Q5VYK3 1845 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 GLOD5A6NK44 160 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 IGHV3-13P01766 116 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 LINGO3P0C6S8 592 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 PORP16435 677 aaPredicted RBP4.38□□□□□ -1.71
MDM2-220ENST00000496959 NF2P35240 595 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 MAPK12P53778 367 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 STK4Q13043 487 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 LY6DQ14210 128 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 FAM198BQ6UWH4 519 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 NUP54Q7Z3B4 507 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 MMD2Q8IY49 270 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 NDUFAF2Q8N183 169 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 CFAP61Q8NHU2 1237 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 SLC45A3Q96JT2 553 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 LPAR4Q99677 370 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 B3GAT2Q9NPZ5 323 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 USP16Q9Y5T5 823 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 R4GN57 208 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 ABCC4O15439 1325 aa4.38□□□□□ -1.71
MDM2-220ENST00000496959 COL1A1P02452 1464 aaPredicted RBP4.37□□□□□ -1.71
MDM2-220ENST00000496959 DUOX1Q9NRD9 1551 aa4.37□□□□□ -1.71
MDM2-220ENST00000496959 LOC105371242A0A075B767 164 aa4.37□□□□□ -1.71
MDM2-220ENST00000496959 O00370 1275 aa4.37□□□□□ -1.71
MDM2-220ENST00000496959 ERAL1O75616 437 aaKnown RBP4.37□□□□□ -1.71
MDM2-220ENST00000496959 RPL35AP18077 110 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms