RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 OR51B5Q9H339 312 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 TMEFF2Q9UIK5 374 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 IGLON5A6NGN9 336 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 ZNF701M0R085 212 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 SAP18O00422 153 aaKnown RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 FURINP09958 794 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 ERGP11308 486 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 PRKACGP22612 351 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 PCGF2P35227 344 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 EIF2DP41214 584 aaKnown RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 CAMK2GQ13555 558 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 CYP2A13Q16696 494 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 TMEM259Q4ZIN3 620 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 ZC3H12BQ5HYM0 836 aaKnown RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 C9orf50Q5SZB4 431 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 AGBL4Q5VU57 503 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 TMIGD1Q6UXZ0 262 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 KCTD8Q6ZWB6 473 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 HORMAD1Q86X24 394 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 DCP2Q8IU60 420 aaKnown RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 KRT78Q8N1N4 520 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 GOT1L1Q8NHS2 421 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 WDR48Q8TAF3 677 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 C16orf78Q8WTQ4 265 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 TFGQ92734 400 aaPredicted RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 PPCDCQ96CD2 204 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 ISOC1Q96CN7 298 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 LMAN2LQ9H0V9 348 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 POLR1BQ9H9Y6 1135 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 BAG5Q9UL15 447 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 TDRKHQ9Y2W6 561 aaKnown RBP12.53□□□□□ -0.4
GARNL3-220ENST00000496711 PCDHGA8Q9Y5G5 932 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 STON1Q9Y6Q2 735 aa12.53□□□□□ -0.4
GARNL3-220ENST00000496711 hCG_2039718K7EN88 272 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 MID1O15344 667 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 CPNE6O95741 557 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 GBAP04062 536 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 NUDT7P0C024 238 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 ITGAMP11215 1152 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 IL7RP16871 459 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 EEF1B2P24534 225 aaKnown RBP12.52□□□□□ -0.41
GARNL3-220ENST00000496711 IGFBP5P24593 272 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 ARHGDIAP52565 204 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 ITGA1P56199 1179 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 TAS2R38P59533 333 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 VLDLRP98155 873 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 PMS2P3Q13401 168 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 IL18R1Q13478 541 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 RAB39AQ14964 217 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 ARHGAP19Q14CB8 494 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 C16orf72Q14CZ0 275 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 TEAD4Q15561 434 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 CST6Q15828 149 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 WSCD2Q2TBF2 565 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.52□□□□□ -0.41
GARNL3-220ENST00000496711 BROXQ5VW32 411 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 FAM71E1Q6IPT2 247 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 IKBIPQ70UQ0 350 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 VTCN1Q7Z7D3 282 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 ERI1Q8IV48 349 aaKnown RBP12.52□□□□□ -0.41
GARNL3-220ENST00000496711 ZNF740Q8NDX6 193 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 CHDHQ8NE62 594 aaPredicted RBP12.52□□□□□ -0.41
GARNL3-220ENST00000496711 OR5K2Q8NHB8 316 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 MTERF3Q96E29 417 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 CHFRQ96EP1 664 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 SLC23A2Q9UGH3 650 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 CDH7Q9ULB5 785 aa12.52□□□□□ -0.41
GARNL3-220ENST00000496711 FAF1Q9UNN5 650 aaPredicted RBP12.52□□□□□ -0.41
GARNL3-220ENST00000496711 YBX2Q9Y2T7 364 aaKnown RBP12.52□□□□□ -0.41
GARNL3-220ENST00000496711 LOC100130705A0A1B0GUX0 176 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 MYO1GB0I1T2 1018 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 SLC16A6O15403 523 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 PCDH8O95206 1070 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 FKBP9O95302 570 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 APODP05090 189 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 FPR1P21462 350 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 CRHBPP24387 322 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 PTX3P26022 381 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 DNAJA1P31689 397 aaKnown RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 TAS2R50P59544 299 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 GABARAPL2P60520 117 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 HBA1P69905 142 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 C2orf80Q0P641 193 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 ZNF691Q5VV52 312 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 ANGPTL8Q6UXH0 198 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 CHST15Q7LFX5 561 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 PIWIL3Q7Z3Z3 882 aaKnown RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 VN1R5Q7Z5H4 357 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 C17orf64Q86WR6 236 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 FAM129CQ86XR2 697 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 C11orf65Q8NCR3 313 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 OR4K1Q8NGD4 311 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 TUBA1CQ9BQE3 449 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 LGR4Q9BXB1 951 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 RSPH9Q9H1X1 276 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 ADNPQ9H2P0 1102 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 CXorf21Q9HAI6 301 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 PELI2Q9HAT8 420 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 LTB4R2Q9NPC1 389 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 ADPRHL2Q9NX46 363 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms