RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 PCTPQ9UKL6 214 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 PCDHGA6Q9Y5G7 932 aa11.5□□□□□ -0.57
CSNK1E-213ENST00000495232 A0A0A6YYC8 382 aaPredicted RBP11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 H0YIG0 161 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 I3L1I5 382 aaPredicted RBP11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 DLX3O60479 287 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 PLIN3O60664 434 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 SPAG7O75391 227 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 CREG1O75629 220 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 WFS1O76024 890 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 CLDN9O95484 217 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 OTCP00480 354 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 ALBP02768 609 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 PROCP04070 461 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 SERPINA6P08185 405 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 SBK3P0C264 359 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 IMPDH1P20839 514 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 F8A1P23610 371 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 SERPINB1P30740 379 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 PRKAA2P54646 552 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 PCDH1Q08174 1060 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 COL28A1Q2UY09 1125 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 CFAP157Q5JU67 520 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 TTC19Q6DKK2 380 aaPredicted RBP11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 GRHL2Q6ISB3 625 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 LCN10Q6JVE6 187 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 FAM198BQ6UWH4 519 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 ZYG11AQ6WRX3 759 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 OVCH1Q7RTY7 1134 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 GPR155Q7Z3F1 870 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 SYVN1Q86TM6 617 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 BANPQ8N9N5 519 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 SREK1Q8WXA9 508 aaKnown RBP11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 FKBP10Q96AY3 582 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 MOCOSQ96EN8 888 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 FAR2Q96K12 515 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 MAGEB10Q96LZ2 347 aaPredicted RBP11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 SEMA4BQ9NPR2 832 aaPredicted RBP11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 MKS1Q9NXB0 559 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 COPG2Q9UBF2 871 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF282Q9UDV7 671 aaPredicted RBP11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 ADGRE2Q9UHX3 823 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 NXT1Q9UKK6 140 aaKnown RBP11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 TCFL5Q9UL49 500 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 PLLPQ9Y342 182 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 PCDHGA11Q9Y5H2 935 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 MRPS18BQ9Y676 258 aaKnown RBP11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 SLC22A7Q9Y694 548 aa11.49□□□□□ -0.57
CSNK1E-213ENST00000495232 USP24Q9UPU5 2620 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 A0A088AWK7 358 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 CLEC3AO75596 197 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 NSA2O95478 260 aaKnown RBP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 MLYCDO95822 493 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 RPS17P08708 135 aaKnown RBP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 PRKAR1AP10644 381 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 CPA3P15088 417 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 ALOX12P18054 663 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 IL1RNP18510 177 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 CD22P20273 847 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 ITGAXP20702 1163 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF10P21506 573 aaPredicted RBP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 FOLR3P41439 243 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 NAA20P61599 178 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 RPS18P62269 152 aaKnown RBP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 CLCQ05315 142 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 TGM3Q08188 693 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 ASPHQ12797 758 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 DSG2Q14126 1118 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 ERV3-1Q14264 604 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 CASP8Q14790 479 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 CPSF6Q16630 551 aaKnown RBP eCLIP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 TOR1AIP1Q5JTV8 583 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF678Q5SXM1 525 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 MILR1Q7Z6M3 343 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 CCNYL1Q8N7R7 359 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 ARMC2Q8NEN0 867 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 OR9A4Q8NGU2 314 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 TRPC4APQ8TEL6 797 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF483Q8TF39 744 aaPredicted RBP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 NSUN5Q96P11 429 aaKnown RBP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 CDK15Q96Q40 435 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 TMEM237Q96Q45 408 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 CENPKQ9BS16 269 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 NTMT1Q9BV86 223 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 C1QTNF3Q9BXJ4 246 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 RHBGQ9H310 441 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 TRPC4Q9UBN4 977 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 EMCNQ9ULC0 261 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 ZNF490Q9ULM2 529 aaPredicted RBP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 STK38LQ9Y2H1 464 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 PTRH2Q9Y3E5 179 aaKnown RBP11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 NAALAD2Q9Y3Q0 740 aa11.48□□□□□ -0.57
CSNK1E-213ENST00000495232 SEC16AO15027 2179 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 LRIT2A6NDA9 550 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 G3V2L1 256 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 SGK494L7N484 410 aa11.47□□□□□ -0.57
CSNK1E-213ENST00000495232 OR7A17O14581 309 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms