RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 SUPT3HO75486 399 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 KRT38O76015 456 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 BMP10O95393 424 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 B3GALT4O96024 378 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 IGHEP01854 428 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 SERPIND1P05546 499 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 SNRPAP09012 282 aaKnown RBP13.61□□□□□ -0.23
SCAP-213ENST00000494938 IL1RNP18510 177 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 NR1D1P20393 614 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 CNTFP26441 200 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 CASP2P42575 452 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 EMP2P54851 167 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 RRADP55042 308 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 PCDH1Q08174 1060 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 DOC2AQ14183 400 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 SLBPQ14493 270 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCAP-213ENST00000494938 TEX35Q5T0J7 233 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 TIFABQ6ZNK6 161 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 ZC3H7AQ8IWR0 971 aaKnown RBP13.61□□□□□ -0.23
SCAP-213ENST00000494938 TBC1D19Q8N5T2 526 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 SNX31Q8N9S9 440 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 TRPV3Q8NET8 790 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 FDCSPQ8NFU4 85 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 ZCCHC10Q8TBK6 192 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 UTP15Q8TED0 518 aaKnown RBP13.61□□□□□ -0.23
SCAP-213ENST00000494938 UBTD2Q8WUN7 234 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 WDR34Q96EX3 536 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 FER1L6-AS2Q96M78 137 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 CRB3Q9BUF7 120 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 SLC6A16Q9GZN6 736 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 EHD1Q9H4M9 534 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 ANKZF1Q9H8Y5 726 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 C3orf18Q9UK00 162 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 NAALAD2Q9Y3Q0 740 aa13.61□□□□□ -0.23
SCAP-213ENST00000494938 PCDHGA9Q9Y5G4 932 aaKnown RBP13.61□□□□□ -0.23
SCAP-213ENST00000494938 EXOC1LA0A1B0GW35 172 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 LRRC14BA6NHZ5 514 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 SYCE1LA8MT33 242 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 CLGNO14967 610 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 SUV39H1O43463 412 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 CCNT2O60583 730 aaKnown RBP13.6□□□□□ -0.23
SCAP-213ENST00000494938 JRKO75564 520 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 WFS1O76024 890 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 KLHL18O94889 574 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 TBX6O95947 436 aaPredicted RBP13.6□□□□□ -0.23
SCAP-213ENST00000494938 S100BP04271 92 aaPredicted RBP13.6□□□□□ -0.23
SCAP-213ENST00000494938 SERPINA6P08185 405 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 SLC35G6P0C7Q6 338 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 CD22P20273 847 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 CXCR2P25025 360 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 TNFRSF8P28908 595 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 SOX8P57073 446 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 E2F2Q14209 437 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 PCM1Q15154 2024 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 PDK4Q16654 411 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 LACTB2Q53H82 288 aaPredicted RBP13.6□□□□□ -0.23
SCAP-213ENST00000494938 TMIGD1Q6UXZ0 262 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 ASB18Q6ZVZ8 466 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 VN1R5Q7Z5H4 357 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 OR11G2Q8NGC1 345 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 OR51Q1Q8NH59 317 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 SLC25A23Q9BV35 468 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 ANKHQ9HCJ1 492 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 FBXL4Q9UKA2 621 aa13.6□□□□□ -0.23
SCAP-213ENST00000494938 FER1L5A0AVI2 2057 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 OR2W5A6NFC9 320 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 IDSB3KWA1 339 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 K7EPI3 171 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 GALR3O60755 368 aaPredicted RBP13.59□□□□□ -0.23
SCAP-213ENST00000494938 RDH16O75452 317 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 HEXBP07686 556 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 ZNF888P0CJ79 500 aaPredicted RBP13.59□□□□□ -0.23
SCAP-213ENST00000494938 COL6A2P12110 1019 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 ALOX12P18054 663 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 HNF4AP41235 474 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 RGS1Q08116 209 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 HERC3Q15034 1050 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 TBCCQ15814 346 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 RBBP7Q16576 425 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 PFKFB4Q16877 469 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 XKR6Q5GH73 641 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 TECRLQ5HYJ1 363 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 LGSNQ5TDP6 509 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 TAOK1Q7L7X3 1001 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 LRRC70Q7Z2Q7 622 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 ZNF605Q86T29 641 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCAP-213ENST00000494938 KRT78Q8N1N4 520 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 GALNT16Q8N428 558 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 TMEM151AQ8N4L1 468 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 OR5T3Q8NGG3 340 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 C8orf44Q96CB5 159 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 PTCD3Q96EY7 689 aaKnown RBP13.59□□□□□ -0.23
SCAP-213ENST00000494938 NUDT9Q9BW91 350 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 PITHD1Q9GZP4 211 aaPredicted RBP13.59□□□□□ -0.23
SCAP-213ENST00000494938 RHBGQ9H310 441 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 ATP13A2Q9NQ11 1180 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 C14orf105Q9NVL8 296 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 HCN3Q9P1Z3 774 aa13.59□□□□□ -0.23
SCAP-213ENST00000494938 FETUBQ9UGM5 382 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms